How to Install and Uninstall python3-pairix Package on Kali Linux

Last updated: December 23,2024

1. Install "python3-pairix" package

This tutorial shows how to install python3-pairix on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                python3-pairix
            
                    
    
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2. Uninstall "python3-pairix" package

Please follow the guidance below to uninstall python3-pairix on Kali Linux:


    
        
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                sudo apt remove
            
                        
                python3-pairix
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-pairix package on Kali Linux

Package: python3-pairix
Source: python-pairix
Version: 0.3.7-7
Installed-Size: 218
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3 (<< 3.13), python3 (>= 3.11~)
Size: 45968
SHA256: bf686cf5412520881d5e776335c9a7bdc8bee735c4a214789b0564e85a0af763
SHA1: eaf786f290c2d5dc4f28298b112258c229420217
MD5sum: 451f7dcb09a23a2fca9ccc2178ca48c1
Description: 1D/2D indexing and querying with a pair of genomic coordinates
Pairix is a tool for indexing and querying on a block-compressed text
file containing pairs of genomic coordinates.
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Pairix is a stand-alone C program that was written on top of tabix as a
tool for the 4DN-standard pairs file format describing Hi-C data:
pairs_format_specification.md
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However, Pairix can be used as a generic tool for indexing and querying
any bgzipped text file containing genomic coordinates, for either 2D- or
1D- indexing and querying.
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For example: given the custom text file below, you want to extract
specific lines from the Pairs file further below. An awk command would
read the Pairs file from beginning to end. Pairix creates an index and
uses it to access the file from a relevant position by taking advantage
of bgzf compression, allowing for a fast query on large files.
Description-md5:
Multi-Arch: same
Homepage: https://github.com/4dn-dcic/pairix
Section: python
Priority: optional
Filename: pool/main/p/python-pairix/python3-pairix_0.3.7-7_amd64.deb