How to Install and Uninstall qcumber Package on Kali Linux

Last updated: October 04,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "qcumber" package

This is a short guide on how to install qcumber on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                qcumber
            
                    
    
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2. Uninstall "qcumber" package

Please follow the steps below to uninstall qcumber on Kali Linux:


    
        
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                sudo apt remove
            
                        
                qcumber
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the qcumber package on Kali Linux

Package: qcumber
Version: 2.3.0-2
Installed-Size: 236
Maintainer: Debian Med Packaging Team
Architecture: all
Replaces: qc-pipeline
Provides: qc-pipeline
Depends: python3:any, debconf (>= 0.5) | debconf-2.0, python3-jinja2, python3-matplotlib, python3-biopython, libjs-angularjs, libjs-bootstrap, libjs-d3, libjs-jquery, r-base-core, r-bioc-savr, r-cran-ggplot2, r-cran-quantreg, snakemake
Conflicts: qc-pipeline
Size: 50488
SHA256: 033afeb7358c5e35109c648bbc275842755dc14c328f84007af5a389c06501cb
SHA1: 4f5c9412dd7aed72073dd73b743f7994f6365d06
MD5sum: e8e75d1efdd4265bdbe9e121b7109314
Description: quality control of genomic sequences
QCPipeline is a tool for quality control. The workflow is as follows:
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1. Quality control with FastQC
2. Trim Reads with Trimmomatic
3. Quality control of trimmed reads with FastQC
4. Map reads against reference using bowtie2
5. Classify reads with Kraken
Description-md5:
Homepage: https://gitlab.com/RKIBioinformaticsPipelines/QCumber
Section: science
Priority: optional
Filename: pool/main/q/qcumber/qcumber_2.3.0-2_all.deb