How to Install and Uninstall seer Package on Kali Linux

Last updated: May 17,2024

1. Install "seer" package

Please follow the instructions below to install seer on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                seer
            
                    
    
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2. Uninstall "seer" package

Learn how to uninstall seer on Kali Linux:


    
        
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                sudo apt remove
            
                        
                seer
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the seer package on Kali Linux

Package: seer
Source: seer (1.1.4-7)
Version: 1.1.4-7+b2
Installed-Size: 4924
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libarmadillo12 (>= 1:12.6.4+dfsg), libblas3 | libblas.so.3, libboost-program-options1.83.0 (>= 1.83.0), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgzstream0 (>= 1.5+dfsg), libhdf5-103-1, libstdc++6 (>= 13.1), zlib1g (>= 1:1.1.4), libtext-csv-perl
Suggests: fsm-lite
Size: 1197232
SHA256: 05c621ee648b641873880b63265081817b582eef2b2f45b1fdc60db9b61564bc
SHA1: 9691564b08a05cd2b78cbdbe7ef38ae971a65b74
MD5sum: 643e1365841bf2795b2904474144a6db
Description: genomic sequence element (kmer) enrichment analysis
Bacterial genomes vary extensively in terms of both gene content and
gene sequence - this plasticity hampers the use of traditional SNP-based
methods for identifying all genetic associations with phenotypic
variation. SEER provides a computationally scalable and widely
applicable statistical method for the identification of sequence
elements that are significantly enriched in a phenotype of interest.
SEER is applicable to even tens of thousands of genomes by counting variable-
length k-mers using a distributed string-mining algorithm. Robust
options are provided for association analysis that also correct for the
clonal population structure of bacteria. Using large collections of
genomes of the major human pathogen Streptococcus pneumoniae, SEER
identifies relevant previously characterised resistance determinants for
several antibiotics.
Description-md5:
Homepage: https://github.com/johnlees/seer
Section: science
Priority: optional
Filename: pool/main/s/seer/seer_1.1.4-7+b2_amd64.deb