How to Install and Uninstall vcfanno Package on Kali Linux

Last updated: December 23,2024

1. Install "vcfanno" package

This guide let you learn how to install vcfanno on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                vcfanno
            
                    
    
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2. Uninstall "vcfanno" package

Please follow the instructions below to uninstall vcfanno on Kali Linux:


    
        
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                sudo apt remove
            
                        
                vcfanno
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the vcfanno package on Kali Linux

Package: vcfanno
Version: 0.3.5+ds-2
Installed-Size: 6683
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34)
Size: 2303304
SHA256: 4a8170de5aab33254f62cfcc4332494b2240db99e168d5a9e6c4c1f6b7e491c7
SHA1: 7ad5b6a79061379e01cef2241913a3cfdf196a0c
MD5sum: 536e67c6227c300bbb37071b2fefe565
Description: annotate a VCF with other VCFs/BEDs/tabixed files
Vcfanno allows you to quickly annotate your VCF with any number of INFO
fields from any number of VCFs or BED files. It uses a simple conf file
to allow the user to specify the source annotation files and fields and
how they will be added to the info of the query VCF.
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* For VCF, values are pulled by name from the INFO field with special
cases of ID and FILTER to pull from those VCF columns.
* For BED, values are pulled from (1-based) column number.
* For BAM, depth (count), "mapq" and "seq" are currently supported.
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Vcfanno is written in go and it supports custom user-scripts written in
Lua. It can annotate more than 8000 variants per second with 34
annotations from 9 files on a modest laptop and over 30K variants per
second using 12 processes on a server.
Description-md5:
Homepage: https://github.com/brentp/vcfanno
Built-Using: golang-1.21 (= 1.21.5-1), golang-github-biogo-hts (= 1.4.4+dfsg1-1), golang-github-brentp-bix (= 0.0~git20190718.00aa7a7+ds-2), golang-github-brentp-goluaez (= 0.0~git20160116.dd35d08-2), golang-github-brentp-irelate (= 0.0.1+ds-1), golang-github-brentp-vcfgo (= 0.0~git20190824.654ed2e-2), golang-github-klauspost-compress (= 1.17.2+ds1-1), golang-github-klauspost-pgzip (= 1.2.6-1), golang-github-pkg-errors (= 0.9.1-3), golang-github-shenwei356-xopen (= 0.0~git20181203.f4f16dd-2), golang-github-yuin-gluare (= 0.0~git20170607.d7c94f1-2), golang-github-yuin-gopher-lua (= 0.0~git20170915.0.eb1c729-5), golang-toml (= 1.3.2-2)
Section: science
Priority: optional
Filename: pool/main/v/vcfanno/vcfanno_0.3.5+ds-2_amd64.deb