How to Install and Uninstall vienna-rna Package on Kali Linux

Last updated: December 25,2024

1. Install "vienna-rna" package

This guide let you learn how to install vienna-rna on Kali Linux


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                vienna-rna
            
                    
    
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2. Uninstall "vienna-rna" package

Here is a brief guide to show you how to uninstall vienna-rna on Kali Linux:


    
        
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                sudo apt remove
            
                        
                vienna-rna
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the vienna-rna package on Kali Linux

Package: vienna-rna
Version: 2.5.1+dfsg-1
Installed-Size: 88785
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.35), libdlib19.1 (>= 19.24+dfsg), libgcc-s1 (>= 3.3.1), libgomp1 (>= 4.9), libgsl27 (>= 2.7.1), libgslcblas0 (>= 2.7.1), liblapack3 | liblapack.so.3, libmpfr6 (>= 3.1.3), libstdc++6 (>= 11)
Recommends: readseq
Size: 3100504
SHA256: 5b30d53a044ed2defebf5c5319003a035c8b157417343faeea3bc0101c51f2af
SHA1: a35eb932a29894b21d918fc330cb1bb5d087675c
MD5sum: dd5c14c6970887b4274133d70f929bb3
Description: RNA sequence analysis
The Vienna RNA Package consists of a C code library and several
stand-alone programs for the prediction and comparison of RNA secondary
structures. It is developed and maintained by the group of Ivo Hofacker
in Vienna.
.
RNA secondary structure prediction through energy minimization is the
most used function in the package. It provides three kinds of dynamic
programming algorithms for structure prediction:
* the minimum free energy algorithm of (Zuker & Stiegler 1981) which
yields a single optimal structure,
* the partition function algorithm of (McCaskill 1990) which calculates
base pair probabilities in the thermodynamic ensemble, and the
suboptimal folding algorithm of (Wuchty et.al 1999) which generates
all suboptimal structures within a given energy range of the optimal
energy.
.
For secondary structure comparison, the package contains several
measures of distance (dissimilarities) using either string alignment or
tree-editing (Shapiro & Zhang 1990). Finally, is provided an algorithm
to design sequences with a predefined structure (inverse folding).
The RNAforester package is a tool for aligning RNA secondary structures
and it's user interface integrates to those of the tools of the
Vienna RNA package.
Description-md5:
Homepage: https://www.tbi.univie.ac.at/RNA/
Section: non-free/science
Priority: optional
Filename: pool/non-free/v/vienna-rna/vienna-rna_2.5.1+dfsg-1_amd64.deb