How to Install and Uninstall yanosim Package on Kali Linux

Last updated: December 29,2024

1. Install "yanosim" package

In this section, we are going to explain the necessary steps to install yanosim on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                yanosim
            
                    
    
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2. Uninstall "yanosim" package

Please follow the guidance below to uninstall yanosim on Kali Linux:


    
        
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                sudo apt remove
            
                        
                yanosim
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the yanosim package on Kali Linux

Package: yanosim
Version: 0.1-5
Installed-Size: 45
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3-click, python3-numpy, python3-pysam, python3-scipy, python3:any
Size: 9624
SHA256: bdfe2b4cea41d9ef2ed6a1ed103444bb1b8d86b72c41aaf136250d61dc860a2c
SHA1: 606fd436d6fed993ba343a7923199940afc95106
MD5sum: 1d7d0f64b16f3b7049dc16b92b4edadd
Description: read simulator nanopore DRS datasets
Yanosim has three options:
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1. yanosim model:
Creates an model of mismatches, insertions and deletions
based on an alignment of nanopore DRS reads to a
reference. Reads should be aligned to a transcriptome
i.e. without spliced alignment, using minimap2. They
should have the cs tag.
2. yanosim quantify:
Quantify the number of reads mapping to each
transcript in a reference, so that the right number
of reads can be simulated.
3. yanosim simulate:
Given a model created using yanosim model, and
per-transcript read counts created using yanosim
simulate, simulate error-prone long-reads from the
given fasta file.
Description-md5:
Homepage: https://github.com/bartongroup/yanosim
Section: science
Priority: optional
Filename: pool/main/y/yanosim/yanosim_0.1-5_amd64.deb