How to Install and Uninstall med-bio Package on Ubuntu 18.04 LTS (Bionic Beaver)

Last updated: May 12,2024

1. Install "med-bio" package

Please follow the step by step instructions below to install med-bio on Ubuntu 18.04 LTS (Bionic Beaver)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                med-bio
            
                    
    
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2. Uninstall "med-bio" package

Please follow the step by step instructions below to uninstall med-bio on Ubuntu 18.04 LTS (Bionic Beaver):


    
        
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                sudo apt remove
            
                        
                med-bio
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the med-bio package on Ubuntu 18.04 LTS (Bionic Beaver)

Package: med-bio
Architecture: all
Version: 3.0.1ubuntu1
Priority: optional
Section: universe/misc
Source: debian-med
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 47
Depends: med-tasks (= 3.0.1ubuntu1), med-config (= 3.0.1ubuntu1)
Recommends: abacas, acedb-other, acedb-other-belvu, acedb-other-dotter, adapterremoval, adun-core, aegean, aevol, alien-hunter, alter-sequence-alignment, altree, amap-align, ampliconnoise, andi, anfo, aragorn, arden, ariba, art-nextgen-simulation-tools, artemis, artfastqgenerator, atac, augustus, autodock, autodock-vina, autogrid, axe-demultiplexer, baitfisher, ballview, bamtools, barrnap, bcftools, beagle, beast2-mcmc, bedops, bedtools, berkeley-express, bio-eagle, bio-rainbow, bio-tradis, blasr, bowtie, bowtie2, boxshade, brig, bwa, cassiopee, cd-hit, cdbfasta, cgview, chimeraslayer, circlator, circos, clearcut, clonalframe, clustalo, clustalw, codonw, concavity, conservation-code, crac, cutadapt, daligner, dascrubber, datamash, dawg, dazzdb, deepnano, dialign, dialign-tx, diamond-aligner, dindel, discosnp, disulfinder, dnaclust, dssp, dwgsim, ea-utils, ecopcr, edtsurf, embassy-domainatrix, embassy-domalign, embassy-domsearch, emboss, examl, exonerate, falcon, fastahack, fastaq, fastdnaml, fastlink, fastml, fastqc, fastqtl, fasttree, fastx-toolkit, ffindex, figtree, filo, fitgcp, flexbar, fml-asm, freebayes, freecontact, fsa, fsm-lite, gamgi, garli, garlic, gasic, gbrowse, gdpc, genometools, gff2aplot, gff2ps, ghemical, giira, glam2, graphlan, grinder, gromacs, gubbins, gwama, harvest-tools, hhsuite, hilive, hisat2, hmmer, hmmer2, hyphy-mpi | hyphy-pt, hyphygui, idba, indelible, infernal, ipig, iqtree, iva, jaligner, jalview, jellyfish, jmodeltest, jmol, kalign, khmer, kineticstools, king-probe, kissplice, kmc, kmer, kraken, lambda-align, last-align, leaff, lefse, librg-utils-perl, libvcflib-tools, logol-bin, loki, ltrsift, macs, macsyfinder, maffilter, mafft, mapdamage, mapsembler2, maq, maqview, mash, massxpert, mauve-aligner, melting, meryl, metaphlan2, metastudent, mhap, microbegps, microbiomeutil, minia, miniasm, minimap, mipe, mira-assembler, mlv-smile, mothur, mptp, mrbayes, mummer, murasaki, muscle, mustang, nanopolish, nast-ier, ncbi-blast+, ncbi-blast+-legacy, ncbi-entrez-direct, ncbi-epcr, ncbi-seg, ncbi-tools-bin, ncbi-tools-x11, ncl-tools, ncoils, neobio, njplot, norsnet, norsp, openms, paleomix, paraclu, parsinsert, parsnp, pbalign, pbbarcode, pbdagcon, pbgenomicconsensus, pbh5tools, pbhoney, pbjelly, pbsim, pbsuite, pdb2pqr, perlprimer, perm, pftools, phipack, phybin, phylip, phyml, physamp, phyutility, picard-tools, piler, pirs, placnet, plasmidomics, plast, plink, plink1.9, plip, poa, populations, poretools, prank, predictnls, predictprotein, prime-phylo, primer3, proalign, probabel, probalign, probcons, proda, prodigal, profbval, profisis, profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun, profphd, profphd-net, profphd-utils, proftmb, progressivemauve, proteinortho, prottest, pycorrfit, pymol, pynast, pyscanfcs, python-cogent, python3-biomaj3, qcumber, qiime, qtltools, r-bioc-annotate, r-bioc-biostrings, r-bioc-cummerbund, r-bioc-deseq2, r-bioc-dnacopy, r-bioc-ebseq, r-bioc-edger, r-bioc-genefilter, r-bioc-geneplotter, r-bioc-gviz, r-bioc-hilbertvis, r-bioc-limma, r-bioc-mergeomics, r-bioc-metagenomeseq, r-bioc-phyloseq, r-bioc-rtracklayer, r-cran-adegenet, r-cran-adephylo, r-cran-ape, r-cran-bio3d, r-cran-distory, r-cran-genabel, r-cran-phangorn, r-cran-pscbs, r-cran-qtl, r-cran-rotl, r-cran-seqinr, r-cran-treescape, r-cran-vegan, r-other-mott-happy.hbrem, radiant, rambo-k, rapmap, rasmol, rate4site, raxml, ray, rdp-alignment, rdp-classifier, rdp-readseq, readseq, reapr, relion-bin | relion-bin+mpi, relion-bin+gui | relion-bin+mpi+gui, repeatmasker-recon, reprof, rna-star, rnahybrid, roary, roguenarok, rsem, rtax, runcircos-gui, saint, salmon, samtools, scrm, scythe, seer, seq-gen, seqan-apps, seqprep, seqsero, seqtk, sga, sibsim4, sickle, sigma-align, sim4, sim4db, smalt, smithwaterman, smrtanalysis, snap, snap-aligner, sniffles, snp-sites, snpomatic, soapdenovo, soapdenovo2, sortmerna, spaced, spades, sprai, squizz, sra-toolkit, srst2, ssake, sspace, ssw-align, stacks, staden, staden-io-lib-utils, subread, suitename, sumaclust, sumatra, sumtrees, surankco, swarm, t-coffee, tabix, tantan, theseus, tigr-glimmer, tm-align, tnseq-transit, tophat, topp, toppred, transdecoder, transrate-tools, transtermhp, tree-puzzle | tree-ppuzzle, treeviewx, trimmomatic, trinityrnaseq, uc-echo, ugene, varna, vcftools, velvet | velvet-long, velvetoptimiser, vsearch, wigeon, wise, zalign
Suggests: abyss, acacia, adun.app, amos-assembler, amoscmp, apollo, arachne, arb, asap, autodocktools, axparafit, axpcoords, bagpipe, bambus, beads, beast-mcmc, biceps, big-blast, bigsdb, biomaj, biomaj-watcher, bitseq, blat, blimps-utils, blixem, blobology, btk-core, cactus, caftools, cain, canu, cap3, ccs, cdna-db, cinema, clonalorigin, clustalx, cluster3, cmap, cnvkit, coalesce, compclust, condetri, contrafold, contralign, coot, copycat, crossbow, crux-toolkit, cufflinks, cytoscape, das-proserver, dazzle, decipher, e-hive, ecell, eigensoft, elph, embassy-phylip, emboss-explorer, emmax, emperor, ensembl, est-db, estferret, estscan, euler-sr, euler2, exabayes, exalt, excavator, fasta, fasta3, ffp, figaro, finex, fluctuate, forester, forge, galaxy, gassst, gatk, gbioseq, gbrowse-syn, genemark, genesplicer, genetrack, genezilla, genographer, gentle, getdata, glimmerhmm, gmap, gmv, grabix, grogui, haploview, hawkeye, hexamer, hilbertvisgui, htqc, igv, inspect, jbrowse, jigsaw, jstreeview, kclust, kempbasu, lagan, lamarc, lofreq, logomat-m, lucy, mach-haplotyper, mage2tab, maker2, malt, manta, martj, maude, maxd, melting-gui, meme, mesquite, metabit, metarep, metastudent-data, metastudent-data-2, metastudent-data-3, mgltools-cadd, mgltools-pmv, mgltools-vision, migrate, minimus, mirbase, mobyle, mobyle-programs, mobyle-tutorials, modeller, molekel, mosaik-aligner, mpsqed, mrs, msatfinder, mugsy, mummergpu, mview, nanocall, nextsv, ngila, ngsqctoolkit, nw-align, oases, obitools, obo-edit, oligoarrayaux, omegamap, operondb, pal2nal, paml, partigene, partitionfinder, patman, patristic, pcma, pfaat, phagefinder, phast, phpphylotree, phylographer, phylophlan, phyloviz-core, phylowin, pipasic, plato, profit, prokka, prot4est, pscan-tfbs, psipred, psortb, pssh2, pyrophosphate-tools, python-orange, python-reaper, qtlcart, qualimap, r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-ensembldb, r-bioc-go.db, r-bioc-savr, r-cran-boolnet, r-cran-metamix, r-cran-pheatmap, r-cran-qqman, r-cran-rentrez, r-other-apmswapp, r-other-valdar-bagphenotype.library, raccoon, raster3d, raxml-ng, rbs-finder, recombine, repeatmasker, rmblast, roadtrips, roche454ace2caf, rose, rosetta, rsat, sambamba, sap, science-workflow, seaview, segemehl, sequenceconverter.app, sift, situs, snpeff, sparta, spice, splitstree, spread-phy, ssaha, strap, strap-base, tacg, taverna, taxinspector, tetra, tide, tigr-glimmer-mg, trace2dbest, tracetuner, treebuilder3d, treetime, treeview, tripal, trnascan-se, tvc, twain, unc-fish, uniprime, varmatch, varscan, vienna-rna, vmd, x-tandem-pipeline, zodiac-zeden
Filename: pool/universe/d/debian-med/med-bio_3.0.1ubuntu1_all.deb
Size: 7322
MD5sum: dbf80ee38357639b04b398dffb747348
SHA1: 5e98094c34de357602f32c62a23adda6058b1b0e
SHA256: d1c1691da50644f3d4f889072d1379a623f1f0558f08f85cf9702e6a791b1bf5
Description: Debian Med bioinformatics packages
Description-md5: 472a50c6504872b123b928f5c13e0f5e