How to Install and Uninstall bali-phy Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 18,2024

1. Install "bali-phy" package

Please follow the step by step instructions below to install bali-phy on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                bali-phy
            
                    
    
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2. Uninstall "bali-phy" package

Please follow the steps below to uninstall bali-phy on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                bali-phy
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bali-phy package on Ubuntu 20.10 (Groovy Gorilla)

Package: bali-phy
Architecture: amd64
Version: 3.5.0.1+dfsg-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 35723
Depends: libboost-chrono1.71.0, libboost-filesystem1.71.0, libboost-program-options1.71.0, libboost-random1.71.0, libc6 (>= 2.29), libcairo2 (>= 1.4.10), libgcc-s1 (>= 3.4), libstdc++6 (>= 9), perl:any, python3
Recommends: r-base, gnuplot
Suggests: figtree, seaview
Filename: pool/universe/b/bali-phy/bali-phy_3.5.0.1+dfsg-1_amd64.deb
Size: 6074168
MD5sum: caf4aeee5807e1c20ba334412fb24900
SHA1: 746d842f553ae9031d4b872171c422522eea6284
SHA256: 1e27113bf4329c6172213bdc686fe63bf0c5f382253c119597f9bcf51dd4fb74
SHA512: ccf0de60e30b7181ebf383e1686ed85302660be9fa5083ee4521e064ca926242ee7bd4b9738ad5803f88257adbad958bff0eed18e4a6ab40dc346b2e325b2087
Homepage: http://www.bali-phy.org
Description-en: Bayesian Inference of Alignment and Phylogeny
BAli-Phy estimates multiple sequence alignments and evolutionary trees
from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC
to estimate evolutionary trees, positive selection, and branch lengths
while averaging over alternative alignments. BAli-Phy can display
alignment ambiguity graphically in an alignment uncertainty (AU) plot.
.
BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes
and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically
estimates relative rates for each gene.
Description-md5: d67566c758d777cfb87f8ae861258ecb