How to Install and Uninstall belvu Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: December 23,2024

1. Install "belvu" package

Here is a brief guide to show you how to install belvu on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                belvu
            
                    
    
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2. Uninstall "belvu" package

Learn how to uninstall belvu on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                belvu
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the belvu package on Ubuntu 20.10 (Groovy Gorilla)

Package: belvu
Architecture: amd64
Version: 4.44.1+dfsg-5ubuntu1
Priority: optional
Section: universe/science
Source: seqtools
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1141
Provides: acedb-other-belvu
Depends: libc6 (>= 2.29), libcairo2 (>= 1.2.4), libcurl4 (>= 7.16.2), libgbtools0 (>= 4.44.1+dfsg), libglib2.0-0 (>= 2.22.0), libgtk2.0-0 (>= 2.12.0), libpango-1.0-0 (>= 1.14.0), libstdc++6 (>= 4.1.1)
Breaks: acedb-other-belvu (<< 4.9.39+dfsg.02-2)
Replaces: acedb-other-belvu (<< 4.9.39+dfsg.02-2)
Filename: pool/universe/s/seqtools/belvu_4.44.1+dfsg-5ubuntu1_amd64.deb
Size: 953304
MD5sum: 617add752bff92edd818897a975ee978
SHA1: eeecc5d2647dde28ca8a0f9cde1b3b6edfe5c38e
SHA256: 2dfe105db4713e708889d793c0758fddf9d280692ea77421f38d345e4e73edf5
SHA512: a6ed88f08b352378d810158ea50369fd0a2fda35191862d432903730e54260e81fd67f448d81f06d8510f3b661352289dbb7e468c0cf0198763b0f3eda691b4d
Homepage: https://www.sanger.ac.uk/science/tools/seqtools
Description-en: multiple sequence alignment viewer and phylogenetic tool
Belvu is a multiple sequence alignment viewer and phylogenetic tool with
an extensive set of user-configurable modes to color residues.
.
* View multiple sequence alignments.
* Residues can be coloured by conservation, with user-configurable
cutoffs and colours.
* Residues can be coloured by residue type (user-configurable).
* Colour schemes can be imported or exported.
* Swissprot (or PIR) entries can be fetched by double clicking.
* The position in the alignment can be easily tracked.
* Manual deletion of rows and columns.
* Automatic editing of rows and columns based on customisable criteria:
- removal of all-gap columns;
- removal of all gaps;
- removal of redundant sequences;
- removal of a column by a user-specified percentage of gaps;
- filtering of sequences by percent identity;
- removal of sequences by a user-specified percentage of gaps;
- removal of partial sequences (those starting or ending with
gaps); and
- removal of columns by conservation (with user-specified
upper/lower cutoffs).
* The alignment can be saved in Stockholm, Selex, MSF or FASTA format.
* Distance matrices between sequences can be generated using a variety
of distance metrics.
* Distance matrices can be imported or exported.
* Phylogenetic trees can be constructed based on various distance-based
tree reconstruction algorithms.
* Trees can be saved in New Hampshire format.
* Belvu can perform bootstrap phylogenetic reconstruction.
Description-md5: bbcc780b6f15b2358daea3060c6035c4