How to Install and Uninstall bedtools Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 05,2024

1. Install "bedtools" package

This guide let you learn how to install bedtools on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                bedtools
            
                    
    
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2. Uninstall "bedtools" package

Learn how to uninstall bedtools on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                bedtools
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the bedtools package on Ubuntu 20.10 (Groovy Gorilla)

Package: bedtools
Architecture: amd64
Version: 2.29.2+dfsg-3build2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2184
Provides: filo
Depends: libbz2-1.0, libc6 (>= 2.29), libgcc-s1 (>= 3.0), liblzma5 (>= 5.1.1alpha+20120614), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0)
Recommends: samtools (>= 1.10)
Conflicts: filo
Replaces: filo
Filename: pool/universe/b/bedtools/bedtools_2.29.2+dfsg-3build2_amd64.deb
Size: 703768
MD5sum: 419ea7507c5ec97074f1625f8808baf1
SHA1: 0e3a79a2b94df5d96aea8b3045fcad1cd6adc7a8
SHA256: 74e9526097bc80cef47d34d93371a31a26840f7a4c4abae231201797700b87fc
SHA512: ef251f10064be313a5e086fe19101b5f4b66e530c53738066ea894aee31cec9ab9bf35fb7918d919bbd836048fa5fbd818962f6487d53cc617fae455fc909ee3
Homepage: https://github.com/arq5x/bedtools2
Description-en: suite of utilities for comparing genomic features
The BEDTools utilities allow one to address common genomics tasks such as
finding feature overlaps and computing coverage. The utilities are largely
based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using
BEDTools, one can develop sophisticated pipelines that answer complicated
research questions by streaming several BEDTools together.
.
The groupBy utility is distributed in the filo package.
Description-md5: 58af131119baf6930c142074f356e7c9