How to Install and Uninstall covtobed Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 15,2024

1. Install "covtobed" package

This guide let you learn how to install covtobed on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                covtobed
            
                    
    
    Copied

2. Uninstall "covtobed" package

Please follow the instructions below to uninstall covtobed on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                covtobed
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the covtobed package on Ubuntu 20.10 (Groovy Gorilla)

Package: covtobed
Architecture: amd64
Version: 1.1.2+dfsg-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 134
Depends: libbamtools2.5.1 (>= 2.5.1+dfsg), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), bamtools, zlib1g
Filename: pool/universe/c/covtobed/covtobed_1.1.2+dfsg-2_amd64.deb
Size: 45072
MD5sum: f94f1dbab00da1a42c894e7b42c921ee
SHA1: 3df700db4f2679e382fad512161efbd03a3e29ba
SHA256: 09ad9544c7fd70a3acf6f6928308d5996cba0c363c848d9680026099eb9fff75
SHA512: 62ab8629f473e972e995e691b66ee2a760ed7cf3525e523b7faae158cc7bcfcb49a5f5418ff3e76742f9d9e7592f63261e8497745221913c885ab47757365c2d
Homepage: https://github.com/telatin/covtobed
Description-en: convert the coverage track from a BAM file into a BED file
Reads one (or more) alignment files (sorted BAM) and prints a BED with
the coverage. It will join consecutive bases with the same coverage, and
can be used to only print a BED file with the regions having a specific
coverage range.
Description-md5: a6c488c096223750eedf5a3012b428d4