How to Install and Uninstall covtobed Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: December 23,2024

1. Install "covtobed" package

This guide covers the steps necessary to install covtobed on Ubuntu 21.04 (Hirsute Hippo)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                covtobed
            
                    
    
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2. Uninstall "covtobed" package

Learn how to uninstall covtobed on Ubuntu 21.04 (Hirsute Hippo):


    
        
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                sudo apt remove
            
                        
                covtobed
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the covtobed package on Ubuntu 21.04 (Hirsute Hippo)

Package: covtobed
Architecture: amd64
Version: 1.2.0+dfsg-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 141
Depends: libbamtools2.5.1 (>= 2.5.1+dfsg), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), bamtools, zlib1g
Filename: pool/universe/c/covtobed/covtobed_1.2.0+dfsg-1_amd64.deb
Size: 46376
MD5sum: efb334fc8f5671f504726743e345fe7e
SHA1: fc61250d495a6e81ff3c1aa28562a8622d0b792b
SHA256: dd643d8ba5cf49cf4fe40936457a1130bf89bcb7b7264aedde127518ec6b610d
SHA512: 196007fe55781fd13f0964ea68d60cf74836bc0500548a31c3a6c94421e1068da42e33976a82976d0601da515a238fd501c51f229c7cec1ba32c1a5f09f5a908
Homepage: https://github.com/telatin/covtobed
Description-en: convert the coverage track from a BAM file into a BED file
Reads one (or more) alignment files (sorted BAM) and prints a BED with
the coverage. It will join consecutive bases with the same coverage, and
can be used to only print a BED file with the regions having a specific
coverage range.
Description-md5: a6c488c096223750eedf5a3012b428d4