How to Install and Uninstall fastqc Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: December 23,2024

1. Install "fastqc" package

Learn how to install fastqc on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                fastqc
            
                    
    
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2. Uninstall "fastqc" package

Please follow the instructions below to uninstall fastqc on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                fastqc
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the fastqc package on Ubuntu 20.10 (Groovy Gorilla)

Package: fastqc
Architecture: all
Version: 0.11.9+dfsg-3
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 556
Depends: libcommons-math3-java, libjbzip2-java, libhtsjdk-java, libfindbin-libs-perl, default-jre
Filename: pool/universe/f/fastqc/fastqc_0.11.9+dfsg-3_all.deb
Size: 365196
MD5sum: a10b6d3dfeaa9f259421ec3b9d42c039
SHA1: 815c9aab8aa72bb54475bef892a5ffa2dc52c720
SHA256: 00265bf399836b9ab7c256c708518cd385af4750b8e476c5890b41cb67e79ce3
SHA512: fbf6b73f7afa6ef1dea16dc9b379495825067e8fcea989119b581fa81694d44e33317db01774917288414e69578d5b5bdca47a88986b06a4ff08130692562910
Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
Description-en: quality control for high throughput sequence data
FastQC aims to provide a simple way to do some quality control checks on
raw sequence data coming from high throughput sequencing pipelines. It
provides a modular set of analyses which you can use to give a quick
impression of whether your data has any problems of which you should
be aware before doing any further analysis.
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The main functions of FastQC are
* Import of data from BAM, SAM or FastQ files (any variant)
* Providing a quick overview to tell you in which areas there may
be problems
* Summary graphs and tables to quickly assess your data
* Export of results to an HTML based permanent report
* Offline operation to allow automated generation of reports without
running the interactive application
Description-md5: 3b9c41bdb218c0f04973c94902b58b8c