How to Install and Uninstall fastqc Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 26,2024

1. Install "fastqc" package

This guide let you learn how to install fastqc on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                fastqc
            
                    
    
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2. Uninstall "fastqc" package

This is a short guide on how to uninstall fastqc on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                fastqc
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the fastqc package on Ubuntu 21.10 (Impish Indri)

Package: fastqc
Architecture: all
Version: 0.11.9+dfsg-4
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 564
Depends: libcommons-math3-java, libjbzip2-java, libhtsjdk-java, libfindbin-libs-perl, libsis-jhdf5-java, default-jre
Filename: pool/universe/f/fastqc/fastqc_0.11.9+dfsg-4_all.deb
Size: 368396
MD5sum: f8fe9bb7c780d76c91f75fec6d0604bc
SHA1: 2453d8c85727267b46f7d43e9ffac6c05806d69d
SHA256: 1f08f124670c2fdae868d1a65404333b06618019c44e42cc2d4f9d508ab970b8
SHA512: dc5900ecc4a3c00851c737d12ceacae91845a516fad8c7080a99038f9c6920697606fa963523d6815b11ded6c86eb296bdc085d14a771af4c2c199958d2fd1a3
Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/
Description-en: quality control for high throughput sequence data
FastQC aims to provide a simple way to do some quality control checks on
raw sequence data coming from high throughput sequencing pipelines. It
provides a modular set of analyses which you can use to give a quick
impression of whether your data has any problems of which you should
be aware before doing any further analysis.
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The main functions of FastQC are
* Import of data from BAM, SAM or FastQ files (any variant)
* Providing a quick overview to tell you in which areas there may
be problems
* Summary graphs and tables to quickly assess your data
* Export of results to an HTML based permanent report
* Offline operation to allow automated generation of reports without
running the interactive application
Description-md5: 3b9c41bdb218c0f04973c94902b58b8c