How to Install and Uninstall gatb-core-testdata Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 06,2024

1. Install "gatb-core-testdata" package

This tutorial shows how to install gatb-core-testdata on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                gatb-core-testdata
            
                    
    
    Copied

2. Uninstall "gatb-core-testdata" package

Please follow the step by step instructions below to uninstall gatb-core-testdata on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                gatb-core-testdata
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the gatb-core-testdata package on Ubuntu 20.10 (Groovy Gorilla)

Package: gatb-core-testdata
Architecture: all
Version: 1.4.2+dfsg-5
Priority: optional
Section: universe/science
Source: gatb-core
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1819
Depends: gatb-core
Filename: pool/universe/g/gatb-core/gatb-core-testdata_1.4.2+dfsg-5_all.deb
Size: 1793820
MD5sum: f33c9a92ffd56f3c303b3d5a1db3dac4
SHA1: e8f0d8e19f050e010e06d7659527c4dbf5de86a5
SHA256: 36c95358ff2066cff99d211807a5fc395671695925b716ffb80d2cd713f35689
SHA512: e1a58f39963fd648b6333a83a7fe0223367e68f6b691e814c4f14a984547af982de30a108323861e97dabf2e3af76801639ee27967250c71e826b59f631401cd
Homepage: https://github.com/GATB/gatb-core
Description-en: Genome Analysis Toolbox with de-Bruijn graph (test data)
The GATB-CORE project provides a set of highly efficient
algorithms to analyse NGS data sets. These methods enable
the analysis of data sets of any size on multi-core desktop
computers, including very huge amount of reads data coming
from any kind of organisms such as bacteria, plants,
animals and even complex samples (e.g. metagenomes).
Read more about GATB at https://gatb.inria.fr/.
By itself GATB-CORE is not an NGS data analysis tool.
However, it can be used to create such tools. There already
exist a set of ready-to-use tools relying on GATB-CORE
library: see https://gatb.inria.fr/software/
.
This package contains some data to test the library.
Description-md5: 7e23156c0c905f1e67407bbf95e7d7e7