How to Install and Uninstall hyphy-pt Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 21,2024

1. Install "hyphy-pt" package

This guide covers the steps necessary to install hyphy-pt on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hyphy-pt
            
                    
    
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2. Uninstall "hyphy-pt" package

In this section, we are going to explain the necessary steps to uninstall hyphy-pt on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                hyphy-pt
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hyphy-pt package on Ubuntu 20.10 (Groovy Gorilla)

Package: hyphy-pt
Architecture: amd64
Version: 2.5.1+dfsg-3build1
Priority: optional
Section: universe/science
Source: hyphy
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2424
Depends: libc6 (>= 2.29), libcurl3-gnutls (>= 7.16.2), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5), hyphy-common (= 2.5.1+dfsg-3build1)
Filename: pool/universe/h/hyphy/hyphy-pt_2.5.1+dfsg-3build1_amd64.deb
Size: 927084
MD5sum: f454e1135086be3f218d62b0cf388f87
SHA1: 2bafc8aa0562ec722767ddfbe0f0b1d1b74c494d
SHA256: d1c148eb9d25545b602b2c271f97fc6b818d2e3366d390f34192259b4aaf244e
SHA512: 09c849dd92b408014ca56fb4c23b593abd79e7240e453b0eef3fb9986b19045e1b578279c5fe15ef8c23ad5ba7fc2aa3d54a8e27388b28f8283de4aa11157170
Homepage: https://hyphy.org/
Description-en: Hypothesis testing using Phylogenies (pthreads version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using pthreads to do multiprocessing.
Description-md5: 27e3303e49d4d235306c006bc3c67912