How to Install and Uninstall hyphy-mpi Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 18,2024

1. Install "hyphy-mpi" package

Please follow the step by step instructions below to install hyphy-mpi on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hyphy-mpi
            
                    
    
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2. Uninstall "hyphy-mpi" package

Please follow the instructions below to uninstall hyphy-mpi on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                hyphy-mpi
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hyphy-mpi package on Ubuntu 20.10 (Groovy Gorilla)

Package: hyphy-mpi
Architecture: amd64
Version: 2.5.1+dfsg-3build1
Priority: optional
Section: universe/science
Source: hyphy
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2551
Depends: libc6 (>= 2.29), libcurl3-gnutls (>= 7.16.2), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libopenmpi3 (>= 4.0.3~rc4), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5), hyphy-common (= 2.5.1+dfsg-3build1)
Filename: pool/universe/h/hyphy/hyphy-mpi_2.5.1+dfsg-3build1_amd64.deb
Size: 962080
MD5sum: 5d543a087c2f9286bd2c65f8f03e7668
SHA1: bedcde9fe3d6457d93b10f16c1fa7e2b6ca1804f
SHA256: 065ca15091afe4085dc9341a7ce06c5a77ed09a72511003e3f39fbcccf311051
SHA512: dd9c0e33644de860106dc9f20ed21d0ca5136888dc4ce16ddd705879a477c70156893bd5e5c953f4b5ca5234559d74627de974fa6ccad02e63a9e3bf9c0557e2
Homepage: https://hyphy.org/
Description-en: Hypothesis testing using Phylogenies (MPI version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using MPI to do multiprocessing.
Description-md5: bf880100fd3d0b8d321965866c6d667b