How to Install and Uninstall indelible Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 02,2024

1. Install "indelible" package

This is a short guide on how to install indelible on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                indelible
            
                    
    
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2. Uninstall "indelible" package

Please follow the step by step instructions below to uninstall indelible on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                indelible
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the indelible package on Ubuntu 20.10 (Groovy Gorilla)

Package: indelible
Architecture: amd64
Version: 1.03-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1475
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 9)
Filename: pool/universe/i/indelible/indelible_1.03-5_amd64.deb
Size: 420088
MD5sum: fa2a443ae67376620b2ce66b4f10db91
SHA1: 6ab3fe7bd06ead09d5330a3f745c319b2be5fa17
SHA256: c673ca8fb21d2457e925eb3817a43a26dcb1900dc7abc0b1a99e7c280499fc51
SHA512: b67fab6bca318dacb62b8e657502c8d6948ca2b950407f87aa53ec81148ed5256ee8bfb81b9756ab8828d5ba18cb40c702172a727c0b6aecf996bb829aadb2f9
Homepage: http://abacus.gene.ucl.ac.uk/software/indelible/
Description-en: powerful and flexible simulator of biological evolution
INDELible is a new, portable, and flexible application for biological
sequence simulation that combines many features in the same place for
the first time. Using a length-dependent model of indel formation it
can simulate evolution of multi-partitioned nucleotide, amino-acid,
or codon data sets through the processes of insertion, deletion, and
substitution in continuous time.
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Nucleotide simulations may use the general unrestricted model or the
general time reversible model and its derivatives, and amino-acid
simulations can be conducted using fifteen different empirical rate
matrices. Substitution rate heterogeneity can be modeled via the
continuous and discrete gamma distributions, with or without a proportion
of invariant sites. INDELible can also simulate under non-homogeneous
and non-stationary conditions where evolutionary models are permitted
to change across a phylogeny.
.
Unique among indel simulation programs, INDELible offers the ability
to simulate using codon models that exhibit nonsynonymous/synonymous
rate ratio heterogeneity among sites and/or lineages.
Description-md5: c481b79347a79fb03305db0619f5a7fa