How to Install and Uninstall indelible Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: December 23,2024

1. Install "indelible" package

Please follow the instructions below to install indelible on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                indelible
            
                    
    
    Copied

2. Uninstall "indelible" package

Please follow the steps below to uninstall indelible on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                indelible
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the indelible package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: indelible
Priority: optional
Section: universe/science
Installed-Size: 996
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.03-2
Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 5.2)
Filename: pool/universe/i/indelible/indelible_1.03-2_amd64.deb
Size: 358364
MD5sum: 12b8df2f05a8fd1915b06abaa8e234ed
SHA1: cb57d4d0c20d77855b2dbb15b1ba06757fc50e9b
SHA256: d34cc1cb6b1852df3e6f2bb29033907fe0a3899b4695949f87c20251e2d53938
Description-en: powerful and flexible simulator of biological evolution
INDELible is a new, portable, and flexible application for biological
sequence simulation that combines many features in the same place for
the first time. Using a length-dependent model of indel formation it
can simulate evolution of multi-partitioned nucleotide, amino-acid,
or codon data sets through the processes of insertion, deletion, and
substitution in continuous time.
.
Nucleotide simulations may use the general unrestricted model or the
general time reversible model and its derivatives, and amino-acid
simulations can be conducted using fifteen different empirical rate
matrices. Substitution rate heterogeneity can be modelled via the
continuous and discrete gamma distributions, with or without a proportion
of invariant sites. INDELible can also simulate under non-homogenous
and non-stationary conditions where evolutionary models are permitted
to change across a phylogeny.
.
Unique among indel simulation programs, INDELible offers the ability
to simulate using codon models that exhibit nonsynonymous/synonymous
rate ratio heterogeneity among sites and/or lineages.
Description-md5: e548651b24b8e9068fdbd8964b712551
Homepage: http://abacus.gene.ucl.ac.uk/software/indelible/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu