How to Install and Uninstall last-align Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "last-align" package

Please follow the step by step instructions below to install last-align on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                last-align
            
                    
    
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2. Uninstall "last-align" package

This guide let you learn how to uninstall last-align on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                last-align
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the last-align package on Ubuntu 20.10 (Groovy Gorilla)

Package: last-align
Architecture: amd64
Version: 1080-1
Built-Using: simde (= 0.5.0-1)
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 20602
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 6), zlib1g (>= 1:1.1.4)
Recommends: python3, python3-pil, parallel
Filename: pool/universe/l/last-align/last-align_1080-1_amd64.deb
Size: 1777308
MD5sum: 17ec51be8f5d8915ec35dc924ff916cd
SHA1: e33d0284848bce4c38173da0180bbf46898884fe
SHA256: 50aa06bf8a7c98d67c1bf4617eae04a6633525caaf2928c372a6768f85ef9c19
SHA512: 39eb2cbb81e6dc4005e0945b4f6e2ccc83671fee43f70c84084858a9e59afc26cb4030fc91a7535e3264dfbc5dc6d06123ff1fd9e8e81f0e8d67dbf1b92992fa
Homepage: http://last.cbrc.jp/
Description-en: genome-scale comparison of biological sequences
LAST is software for comparing and aligning sequences, typically DNA or
protein sequences. LAST is similar to BLAST, but it copes better with very
large amounts of sequence data. Here are two things LAST is good at:
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* Comparing large (e.g. mammalian) genomes.
* Mapping lots of sequence tags onto a genome.
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The main technical innovation is that LAST finds initial matches based on
their multiplicity, instead of using a fixed size (e.g. BLAST uses 10-mers).
This allows one to map tags to genomes without repeat-masking, without becoming
overwhelmed by repetitive hits. To find these variable-sized matches, it uses
a suffix array (inspired by Vmatch). To achieve high sensitivity, it uses a
discontiguous suffix array, analogous to spaced seeds.
Description-md5: 34c07e83cd3ffe3ca9aa9b81ea1ff067