How to Install and Uninstall pyvcf Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 03,2024

1. Install "pyvcf" package

This is a short guide on how to install pyvcf on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                pyvcf
            
                    
    
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2. Uninstall "pyvcf" package

Learn how to uninstall pyvcf on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                pyvcf
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the pyvcf package on Ubuntu 20.10 (Groovy Gorilla)

Package: pyvcf
Architecture: all
Version: 0.6.8+git20170215.476169c-7
Priority: optional
Section: universe/python
Source: python-pyvcf
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 26
Depends: python3:any, python3-vcf
Filename: pool/universe/p/python-pyvcf/pyvcf_0.6.8+git20170215.476169c-7_all.deb
Size: 7632
MD5sum: b616533b3348eacd253c96afdc5a0a0b
SHA1: b6e4497bbaca0fe126459619e3e536bc68b7ae8c
SHA256: df5e5b3a016e6dcd714be2f66dbff3a04421a91ff4b9685389c1cf40f4eb9b2a
SHA512: 4470b89add0d0ed68747cd17308d6422428ebecdbf44c0f1b2d73afbdcf7746d68da51f22dd8fbcc945706323a9f2c7e2dbffa6a2e69b8346ad23b9f3c1e932b
Homepage: https://pypi.python.org/pypi/PyVCF
Description-en: helper scripts for Variant Call Format (VCF) parser
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides helper scripts using python3-pyvcf.
Description-md5: b7ae834ad458cf6b0fc07cbe2d8daaca