How to Install and Uninstall r-bioc-pwmenrich Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: December 27,2024

1. Install "r-bioc-pwmenrich" package

Here is a brief guide to show you how to install r-bioc-pwmenrich on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-pwmenrich
            
                    
    
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2. Uninstall "r-bioc-pwmenrich" package

Please follow the steps below to uninstall r-bioc-pwmenrich on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-pwmenrich
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-pwmenrich package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-pwmenrich
Architecture: all
Version: 4.24.2-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 5656
Depends: r-base-core (>= 4.0.2-1build1), r-api-4.0, r-api-bioc-3.11, r-bioc-biocgenerics, r-bioc-biostrings, r-bioc-seqlogo, r-cran-gdata, r-cran-evd, r-bioc-bsgenome
Recommends: r-cran-testthat
Suggests: r-cran-gtools, r-cran-knitr
Filename: pool/universe/r/r-bioc-pwmenrich/r-bioc-pwmenrich_4.24.2-1_all.deb
Size: 5407608
MD5sum: 524c592e7f486eb4f2834df8272838ee
SHA1: 164d0bccc4b81f95d6e2cb7e9a9fbd5b758adde5
SHA256: ad3f02855c885dabd1e133a818e114e49831fc15805c481c4f77783f7945d581
SHA512: d0c19ae313d1b13ecbb21d373b4e3abfc6524ac550f9ccb55d4667458980a1153e4135d1e7ee899be854fb250091ac192a310353dca0f2de7052fd9da76c34b6
Homepage: https://bioconductor.org/packages/PWMEnrich/
Description-en: PWM enrichment analysis
A toolkit of high-level functions for DNA motif scanning
and enrichment analysis built upon Biostrings. The main
functionality is PWM enrichment analysis of already known PWMs
(e.g. from databases such as MotifDb), but the package also
implements high-level functions for PWM scanning and
visualisation. The package does not perform "de novo" motif
discovery, but is instead focused on using motifs that are
either experimentally derived or computationally constructed by
other tools.
Description-md5: fea9656ab7d0e66f25fa49a95bd3c909