How to Install and Uninstall r-bioc-rtracklayer Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 14,2024

1. Install "r-bioc-rtracklayer" package

This tutorial shows how to install r-bioc-rtracklayer on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-bioc-rtracklayer
            
                    
    
    Copied

2. Uninstall "r-bioc-rtracklayer" package

Here is a brief guide to show you how to uninstall r-bioc-rtracklayer on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                r-bioc-rtracklayer
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-rtracklayer package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-rtracklayer
Architecture: amd64
Version: 1.48.0-1build1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 6446
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-bioc-genomicranges (>= 1.37.2), r-cran-xml (>= 1.98-0), r-bioc-biocgenerics (>= 0.25.1), r-bioc-s4vectors (>= 0.23.18), r-bioc-iranges (>= 2.13.13), r-bioc-xvector (>= 0.19.7), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-biostrings (>= 2.47.6), r-bioc-zlibbioc, r-cran-rcurl (>= 1.4-2), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), libc6 (>= 2.28), zlib1g (>= 1:1.1.4)
Suggests: r-bioc-bsgenome (>= 1.33.4), r-bioc-genefilter, r-bioc-limma, r-bioc-org.hs.eg.db, r-bioc-genomicfeatures, r-cran-runit
Filename: pool/universe/r/r-bioc-rtracklayer/r-bioc-rtracklayer_1.48.0-1build1_amd64.deb
Size: 5031936
MD5sum: 0cf9fe519e427282b4b2b250afe6fe1b
SHA1: aa20b77436f9776d782ab25bdb8273d80a8552ed
SHA256: a541b669b8134d50aff2e458dabffe3228835d61780223794f4f22b0cf94d192
SHA512: a3f92fd2aa8429ad91f71998b99896d9cbac5d87011158b019d47b87d13f3b7f6e5f8d0730fecdbc0799f871fd4a21966c1641917e7d17a4578746db653ef2e4
Homepage: https://bioconductor.org/packages/rtracklayer/
Description-en: GNU R interface to genome browsers and their annotation tracks
Extensible framework for interacting with multiple genome browsers
(currently UCSC built-in) and manipulating annotation tracks in various
formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit
built-in). The user may export/import tracks to/from the supported
browsers, as well as query and modify the browser state, such as the
current viewport.
Description-md5: 584b389dc8361ea2de736a9b4701b612