How to Install and Uninstall seaview Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "seaview" package

Here is a brief guide to show you how to install seaview on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                seaview
            
                    
    
    Copied

2. Uninstall "seaview" package

Here is a brief guide to show you how to uninstall seaview on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                seaview
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the seaview package on Ubuntu 20.10 (Groovy Gorilla)

Package: seaview
Architecture: amd64
Version: 1:5.0.2-3
Priority: optional
Section: multiverse/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1022
Depends: libc6 (>= 2.29), libfltk-images1.3, libfltk1.3 (>= 1.3.4), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: clustalo, muscle, phyml
Filename: pool/multiverse/s/seaview/seaview_5.0.2-3_amd64.deb
Size: 391156
MD5sum: d7cd268b00ff9c2d710fde6c6fcec985
SHA1: e14f85f3c76bf92dc237984b073a2609423b0f23
SHA256: 98b9295e21431f30aeaa263b8f569aff87db907b4f3d29c9d8e8f8e1dd3227d3
SHA512: 789ae913629e83adefdb17e1946b27c8f62c05243628a2557ee22571a0aa0b3aab84d4bd678e603eb3cc2cd41abc85c679c05b1b065f04b887e12f6f50b1b09f
Homepage: https://doua.prabi.fr/software/seaview
Description-en: Multiplatform interface for sequence alignment and phylogeny
SeaView is a viewer and editor of multiple sequence alignments, i.e.
DNA or protein sequences are positioned each in their own separate line,
such that the nucleotide/amino acid at a particular position (column) is
presumed to have the same biochemical property.
.
SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
Alignments can be manually edited. It drives the programs Muscle or Clustal
Omega for multiple sequence alignment, and also allows one to use any external
alignment algorithm able to read and write FASTA-formatted files. It computes
phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or
by maximum likelihood using the program PhyML 3.0.
.
SeaView draws phylogenetic
trees on screen or PostScript files, and allows one to download sequences from
EMBL/GenBank/UniProt using the Internet.
Description-md5: a82e7d5dbc9d5aa2cf6662e48d7aa245