How to Install and Uninstall seaview Package on Ubuntu 21.10 (Impish Indri)
Last updated: January 09,2025
1. Install "seaview" package
This tutorial shows how to install seaview on Ubuntu 21.10 (Impish Indri)
$
sudo apt update
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$
sudo apt install
seaview
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2. Uninstall "seaview" package
This tutorial shows how to uninstall seaview on Ubuntu 21.10 (Impish Indri):
$
sudo apt remove
seaview
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the seaview package on Ubuntu 21.10 (Impish Indri)
Package: seaview
Architecture: amd64
Version: 1:5.0.4-1
Priority: optional
Section: multiverse/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1022
Depends: libc6 (>= 2.29), libfltk-images1.3, libfltk1.3 (>= 1.3.4), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: clustalo, muscle, phyml
Filename: pool/multiverse/s/seaview/seaview_5.0.4-1_amd64.deb
Size: 391696
MD5sum: 3c9e60cc5ea054853c85490ae65cc4f4
SHA1: e6decb64d84607129ccc163ddf6ba0de7b394724
SHA256: 191f7f699cd7b4f85a5346730821e9aedbdd78b3b9a48eb29854ae53885a746b
SHA512: bdb6f5f8ec9263d8e807566d09fec6fcdd63fc16b17ee4a97bc72380ec6975924acd0d5f7dc621720e2c6d55d74d6bf95e144c76b288d2d401f96a7f88a0ca60
Homepage: https://doua.prabi.fr/software/seaview
Description-en: Multiplatform interface for sequence alignment and phylogeny
SeaView is a viewer and editor of multiple sequence alignments, i.e.
DNA or protein sequences are positioned each in their own separate line,
such that the nucleotide/amino acid at a particular position (column) is
presumed to have the same biochemical property.
.
SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
Alignments can be manually edited. It drives the programs Muscle or Clustal
Omega for multiple sequence alignment, and also allows one to use any external
alignment algorithm able to read and write FASTA-formatted files. It computes
phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or
by maximum likelihood using the program PhyML 3.0.
.
SeaView draws phylogenetic
trees on screen or PostScript files, and allows one to download sequences from
EMBL/GenBank/UniProt using the Internet.
Description-md5: a82e7d5dbc9d5aa2cf6662e48d7aa245
Architecture: amd64
Version: 1:5.0.4-1
Priority: optional
Section: multiverse/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1022
Depends: libc6 (>= 2.29), libfltk-images1.3, libfltk1.3 (>= 1.3.4), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: clustalo, muscle, phyml
Filename: pool/multiverse/s/seaview/seaview_5.0.4-1_amd64.deb
Size: 391696
MD5sum: 3c9e60cc5ea054853c85490ae65cc4f4
SHA1: e6decb64d84607129ccc163ddf6ba0de7b394724
SHA256: 191f7f699cd7b4f85a5346730821e9aedbdd78b3b9a48eb29854ae53885a746b
SHA512: bdb6f5f8ec9263d8e807566d09fec6fcdd63fc16b17ee4a97bc72380ec6975924acd0d5f7dc621720e2c6d55d74d6bf95e144c76b288d2d401f96a7f88a0ca60
Homepage: https://doua.prabi.fr/software/seaview
Description-en: Multiplatform interface for sequence alignment and phylogeny
SeaView is a viewer and editor of multiple sequence alignments, i.e.
DNA or protein sequences are positioned each in their own separate line,
such that the nucleotide/amino acid at a particular position (column) is
presumed to have the same biochemical property.
.
SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
Alignments can be manually edited. It drives the programs Muscle or Clustal
Omega for multiple sequence alignment, and also allows one to use any external
alignment algorithm able to read and write FASTA-formatted files. It computes
phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or
by maximum likelihood using the program PhyML 3.0.
.
SeaView draws phylogenetic
trees on screen or PostScript files, and allows one to download sequences from
EMBL/GenBank/UniProt using the Internet.
Description-md5: a82e7d5dbc9d5aa2cf6662e48d7aa245