How to Install and Uninstall sibsim4 Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 21,2024

1. Install "sibsim4" package

Learn how to install sibsim4 on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                sibsim4
            
                    
    
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2. Uninstall "sibsim4" package

Learn how to uninstall sibsim4 on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                sibsim4
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the sibsim4 package on Ubuntu 20.10 (Groovy Gorilla)

Package: sibsim4
Architecture: amd64
Version: 0.20-5
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 73
Depends: libc6 (>= 2.14)
Filename: pool/universe/s/sibsim4/sibsim4_0.20-5_amd64.deb
Size: 30560
MD5sum: 3a2faf65a0e16d8fcbe36033b7eb7a57
SHA1: b9184e46d972444d9af73160a3b526bff7183ff0
SHA256: d2496bf4bf543b8d58e2465882cbb9277f8075bf294d669c0c43285fe23a593a
SHA512: 23e69c4d0f92e6ae8d07e345f3bdbcb985011b0291452a32284eeb9e5958ab3bae0bdc5dd5cb22dadc9d30487bebe2e509f1a6df6ed5dd910a98285131f675a0
Homepage: http://sibsim4.sourceforge.net/
Description-en: align expressed RNA sequences on a DNA template
The SIBsim4 project is based on sim4, which is a program designed to align
an expressed DNA sequence with a genomic sequence, allowing for introns.
SIBsim4 is a fairly extensive rewrite of the original code with the following
goals:
* speed improvement;
* allow large, chromosome scale, DNA sequences to be used;
* provide more detailed output about splice types;
* provide more detailed output about polyA sites;
* misc code cleanups and fixes.
Description-md5: 0ddb1da7cc812b1724bd48ebe261e0e3