How to Install and Uninstall spoa Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 05,2024

1. Install "spoa" package

This guide covers the steps necessary to install spoa on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                spoa
            
                    
    
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2. Uninstall "spoa" package

Please follow the steps below to uninstall spoa on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                spoa
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the spoa package on Ubuntu 20.10 (Groovy Gorilla)

Package: spoa
Architecture: amd64
Version: 3.4.0+ds-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 107
Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libspoa4.0.0 (>= 3.4.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Filename: pool/universe/s/spoa/spoa_3.4.0+ds-2_amd64.deb
Size: 29980
MD5sum: 6d8fb6bf5273db3c2f4a7cd14f7f98a8
SHA1: 8d75d02684ed3c1e0bf1090edc8b0064f478d84b
SHA256: ab8a8c66715afbbd44b59537c2c96ab1dcfee52e70ff50769ac43dc2765c56cb
SHA512: 8c1de1403f07b5c88a0cfdb9035298369491f05720d5959a97160d2e312b2dad2e624eef8e22ed62f90600bb8eca3d2e2af80b4444b369532bf12d4843db863b
Homepage: https://github.com/rvaser/spoa
Description-en: SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
Description-md5: 6d886275fce52caa820f8260165fc77b