How to Install and Uninstall trace2dbest Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 03,2024

1. Install "trace2dbest" package

This guide let you learn how to install trace2dbest on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                trace2dbest
            
                    
    
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2. Uninstall "trace2dbest" package

Please follow the instructions below to uninstall trace2dbest on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                trace2dbest
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the trace2dbest package on Ubuntu 20.10 (Groovy Gorilla)

Package: trace2dbest
Architecture: all
Version: 3.0.1-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 132
Depends: perl
Filename: pool/universe/t/trace2dbest/trace2dbest_3.0.1-1_all.deb
Size: 29472
MD5sum: 98db8d9bf0e31e139305153a830df837
SHA1: 40471feee44fc8629657ae9adf283f17d6bb3ee8
SHA256: ebcb50c0caa8b1780e601a4e2574a4273207e7aeb685ae02705cdfcbcf7166b5
SHA512: 77333fc76ad645d6a48c6a59ea63fd64d6f6a460e77a6290543cae68dcf30b82d471eefc6d9fcfb34636fc02b9b1b1901f2a1f6c72af2a38a9be37ee0db5e288
Homepage: http://www.nematodes.org/bioinformatics/trace2dbEST/
Description-en: bulk submission of chromatogram data to dbEST
ESTs are short sequences derived from reverse-transcribed RNA.
Their abundances yield insights in the expression of genes across
tissues, support the discovery of new genes and allow one to assess
the coverage of whole genome sequencing projects. Public databases
like dbEST at the NCBI collect this data.
.
trace2dbEST process raw sequenceing chromatograph trace files from
EST projects into quality-checked sequences, ready for submission to
dbEST. trace2dbEST guides you through the creation of all the necessary
files for submission of ESTs to dbEST. trace2dbest makes use of other
software (available free under academic licence) that you will need to
have installed, namely phred, cross_match and (optionally) BLAST.
Description-md5: 6be234b56cdf72ac57faadc3cfc6ec4c