How to Install and Uninstall trace2dbest Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 26,2024

1. Install "trace2dbest" package

Please follow the step by step instructions below to install trace2dbest on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                trace2dbest
            
                    
    
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2. Uninstall "trace2dbest" package

Learn how to uninstall trace2dbest on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                trace2dbest
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the trace2dbest package on Ubuntu 21.10 (Impish Indri)

Package: trace2dbest
Architecture: all
Version: 3.0.1-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 135
Depends: perl:any
Filename: pool/universe/t/trace2dbest/trace2dbest_3.0.1-2_all.deb
Size: 29896
MD5sum: 2c50a53edcd39b7844b70966ee59743a
SHA1: b6d363557eff92fa63a1b8e2f18d77e70f062ecf
SHA256: d73ebe8893854804380903146e88f6566f6226f69c1f65188dd09e1b231208b3
SHA512: e4a96ca538e47b91f4655801e859386e2a493b19bcc1cf9f6dd13a05ec2a4f8df68c127086019ccc42830c3b1d118e93b52c013696f2cf5cc5a4799530754440
Homepage: http://www.nematodes.org/bioinformatics/trace2dbEST/
Description-en: bulk submission of chromatogram data to dbEST
ESTs are short sequences derived from reverse-transcribed RNA.
Their abundances yield insights in the expression of genes across
tissues, support the discovery of new genes and allow one to assess
the coverage of whole genome sequencing projects. Public databases
like dbEST at the NCBI collect this data.
.
trace2dbEST process raw sequenceing chromatograph trace files from
EST projects into quality-checked sequences, ready for submission to
dbEST. trace2dbEST guides you through the creation of all the necessary
files for submission of ESTs to dbEST. trace2dbest makes use of other
software (available free under academic licence) that you will need to
have installed, namely phred, cross_match and (optionally) BLAST.
Description-md5: 6be234b56cdf72ac57faadc3cfc6ec4c