How to Install and Uninstall virulencefinder Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 17,2024

1. Install "virulencefinder" package

This guide covers the steps necessary to install virulencefinder on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                virulencefinder
            
                    
    
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2. Uninstall "virulencefinder" package

In this section, we are going to explain the necessary steps to uninstall virulencefinder on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                virulencefinder
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the virulencefinder package on Ubuntu 20.10 (Groovy Gorilla)

Package: virulencefinder
Architecture: all
Version: 2.0.3+git20190809.dde157a-2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 40
Depends: python3:any, python3, python3-tabulate, python3-cgecore, ncbi-blast+, kma
Filename: pool/universe/v/virulencefinder/virulencefinder_2.0.3+git20190809.dde157a-2_all.deb
Size: 10744
MD5sum: 2bb515c7094677afc1dc061357b0bbde
SHA1: c50fb1c445accb5d9f2e2d1bca770298ccaa8802
SHA256: 28aa9d3ccf23ae633ba78d673bdcf79f583de00df33c915896051df9f429e35e
SHA512: e2ca5b5084da5f9f9152f5327bcc306e487dde4895e0d19bc339a8d27bd089848cdc72c5bc8911a6acd7d9b6d86e70433daaee7b5897f4bd2aad49c6de7bc45c
Homepage: https://bitbucket.org/genomicepidemiology/virulencefinder
Description-en: identify virulence genes in total or partial sequenced isolates of bacteria
The VirulenceFinder service contains one Python script
virulencefinder.py which is the script of the latest version of the
VirulenceFinder service. VirulenceFinder identifies viruelnce genes in
total or partial sequenced isolates of bacteria - at the moment only E.
coli, Enterococcus, S. aureus and Listeria are available.
Description-md5: dca05860c4c858809d497a2883ce7288