How to Install and Uninstall virulencefinder Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 07,2024

1. Install "virulencefinder" package

Please follow the guidance below to install virulencefinder on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                virulencefinder
            
                    
    
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2. Uninstall "virulencefinder" package

Learn how to uninstall virulencefinder on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                virulencefinder
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the virulencefinder package on Ubuntu 21.10 (Impish Indri)

Package: virulencefinder
Architecture: all
Version: 2.0.3+git20190809.dde157a-3
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 40
Depends: python3:any, python3, python3-tabulate, python3-cgecore, ncbi-blast+, kma, python3-distutils
Filename: pool/universe/v/virulencefinder/virulencefinder_2.0.3+git20190809.dde157a-3_all.deb
Size: 10990
MD5sum: 1d775967d76eec93675033b21551340d
SHA1: 9c1b647df04b61b23c2e62d87e4f37d67b7aaf8f
SHA256: 33e5b342fa617e75a2a4c7f07c7fcabe210edee97b270a7cd576d38eef4c2531
SHA512: 44fccc9792c20559c2fbe0e79f86e85c2990826dfaa5325c5c0ed0c560959db0a17802ce6b06e368e52b7fadc308b92c41295799017d26c2ab1c88a02249f60d
Homepage: https://bitbucket.org/genomicepidemiology/virulencefinder
Description-en: identify virulence genes in total or partial sequenced isolates of bacteria
The VirulenceFinder service contains one Python script
virulencefinder.py which is the script of the latest version of the
VirulenceFinder service. VirulenceFinder identifies viruelnce genes in
total or partial sequenced isolates of bacteria - at the moment only E.
coli, Enterococcus, S. aureus and Listeria are available.
Description-md5: dca05860c4c858809d497a2883ce7288