How to Install and Uninstall wigeon Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 15,2024

1. Install "wigeon" package

In this section, we are going to explain the necessary steps to install wigeon on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                wigeon
            
                    
    
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2. Uninstall "wigeon" package

Please follow the step by step instructions below to uninstall wigeon on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                wigeon
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the wigeon package on Ubuntu 20.10 (Groovy Gorilla)

Package: wigeon
Architecture: all
Version: 20101212+dfsg1-3
Priority: optional
Section: universe/science
Source: microbiomeutil
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 168
Depends: microbiomeutil-data
Recommends: nast-ier
Filename: pool/universe/m/microbiomeutil/wigeon_20101212+dfsg1-3_all.deb
Size: 29080
MD5sum: f7ab74d486a4fba956362e1d0e7f1214
SHA1: ba57cc549f5f365814dd8108620988a770693366
SHA256: dc19ad00502ab00feb89b3b23faf86ad1283497eff5859a4f08d34a3e5dc18e6
SHA512: b24bbc2b13e052ba28bd694d0f5af14e8127d9477054e564288b58f0f3b9fe781aa5c73aba1f27c70fd2701776a5cd031c1a327860d5d2789f339e359248c2f9
Homepage: http://microbiomeutil.sourceforge.net/
Description-en: reimplementation of the Pintail 16S DNA anomaly detection utility
WigeoN examines the sequence conservation between a query and a trusted
reference sequence, both in NAST alignment format. Based on the sequence
identity between the query and the reference sequence, there is an
expected amount of variation among the alignment. If the observed
variation is greater than the 95% quantile of the distribution of
variation observed between non-anomalous sequences, then it is flagged
as an anomaly.
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WigeoN is a flexible command-line based reimplementation of the Pintail
algorithm Appl Environ Microbiol. 2005 Dec;7112:7724-36.
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WigeoN is useful for flagging chimeras and anomalies only in near
full-length 16S rRNA sequences. WigeoN lacks sensitivity with sequences
less than 1000 bp.
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To run WigeoN, you need NAST-formatted sequences generated by the
nast-ier utility.
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WigeoN is part of the microbiomeutil suite.
Description-md5: 17a324a72dfc1e0439b4af3a8cf0ac4c