How to Install and Uninstall wigeon Package on Ubuntu 21.10 (Impish Indri)

Last updated: April 29,2024

1. Install "wigeon" package

Please follow the steps below to install wigeon on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                wigeon
            
                    
    
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2. Uninstall "wigeon" package

Please follow the steps below to uninstall wigeon on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                wigeon
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the wigeon package on Ubuntu 21.10 (Impish Indri)

Package: wigeon
Architecture: all
Version: 20101212+dfsg1-4
Priority: optional
Section: universe/science
Source: microbiomeutil
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 168
Depends: microbiomeutil-data
Recommends: nast-ier
Filename: pool/universe/m/microbiomeutil/wigeon_20101212+dfsg1-4_all.deb
Size: 28668
MD5sum: 765722a4d84fc0352420515a5f37b524
SHA1: f2c3a6f2df889865b3aa90944ac0c5fa597a2504
SHA256: c1a763d05838646d2beaa710a62b570709030f04b6efb828e64e4cd38b326a50
SHA512: 4fe4e845a9ea1194466fb7b83e2815a5c95048a28460c38b7f01ca9f04c67949daa79930d68296d8b06061ed3977b382a76fb81fdfb6002d536fe9cc06a0fcba
Homepage: http://microbiomeutil.sourceforge.net/
Description-en: reimplementation of the Pintail 16S DNA anomaly detection utility
WigeoN examines the sequence conservation between a query and a trusted
reference sequence, both in NAST alignment format. Based on the sequence
identity between the query and the reference sequence, there is an
expected amount of variation among the alignment. If the observed
variation is greater than the 95% quantile of the distribution of
variation observed between non-anomalous sequences, then it is flagged
as an anomaly.
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WigeoN is a flexible command-line based reimplementation of the Pintail
algorithm Appl Environ Microbiol. 2005 Dec;7112:7724-36.
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WigeoN is useful for flagging chimeras and anomalies only in near
full-length 16S rRNA sequences. WigeoN lacks sensitivity with sequences
less than 1000 bp.
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To run WigeoN, you need NAST-formatted sequences generated by the
nast-ier utility.
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WigeoN is part of the microbiomeutil suite.
Description-md5: 17a324a72dfc1e0439b4af3a8cf0ac4c