How to Install and Uninstall bowtie Package on Ubuntu 21.04 (Hirsute Hippo)

Last updated: November 26,2024

1. Install "bowtie" package

This guide let you learn how to install bowtie on Ubuntu 21.04 (Hirsute Hippo)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                bowtie
            
                    
    
    Copied

2. Uninstall "bowtie" package

Learn how to uninstall bowtie on Ubuntu 21.04 (Hirsute Hippo):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                bowtie
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the bowtie package on Ubuntu 21.04 (Hirsute Hippo)

Package: bowtie
Architecture: amd64
Version: 1.3.0+dfsg1-1
Multi-Arch: foreign
Priority: extra
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 6956
Depends: libc6 (>= 2.27), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), zlib1g (>= 1:1.2.6), python3
Suggests: bowtie-examples
Filename: pool/universe/b/bowtie/bowtie_1.3.0+dfsg1-1_amd64.deb
Size: 1637632
MD5sum: aea09bc30009ae2f8885a34ac5cb42a5
SHA1: c178e113347c07cf418b658cffefcc9bfb3939e5
SHA256: 95a3948c8a21fe07b3bf73459e059ee69984f7538e3616cc6e38b09a2ed3a148
SHA512: 64d39dafd5aa785d1bee2582231e072912aa0e0b7d1eb557e4027f972a9d5c9674115b4ed367bd00283ff2975e96224f1e0b8edc340983e14e1dc6933efb3e05
Homepage: http://bowtie-bio.sourceforge.net/
Description-en: Ultrafast memory-efficient short read aligner
This package addresses the problem to interpret the results from the
latest (2010) DNA sequencing technologies. Those will yield fairly
short stretches and those cannot be interpreted directly. It is the
challenge for tools like Bowtie to give a chromosomal location to the
short stretches of DNA sequenced per run.
.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate
of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
a Burrows-Wheeler index to keep its memory footprint small: typically
about 2.2 GB for the human genome (2.9 GB for paired-end).
Description-md5: 0321cd443ac01259f647358becd22626