How to Install and Uninstall bowtie Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 05,2024

1. Install "bowtie" package

This guide let you learn how to install bowtie on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                bowtie
            
                    
    
    Copied

2. Uninstall "bowtie" package

This tutorial shows how to uninstall bowtie on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                bowtie
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the bowtie package on Ubuntu 20.10 (Groovy Gorilla)

Package: bowtie
Architecture: amd64
Version: 1.2.3+dfsg-4build1
Multi-Arch: foreign
Priority: extra
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 8045
Depends: libc6 (>= 2.27), libgcc-s1 (>= 3.4), libstdc++6 (>= 9), libtbb2 (>= 2017~U7), zlib1g (>= 1:1.2.6), python3
Suggests: bowtie-examples
Filename: pool/universe/b/bowtie/bowtie_1.2.3+dfsg-4build1_amd64.deb
Size: 1840720
MD5sum: bd777a2a62a90c7c14eb2398f565c9c3
SHA1: 54422cc0dff349eb61960931be1da33f44a11269
SHA256: 2bda88448643cbaa728d99d43c5a5ce63d2079f1ce83513ae37bd048c2e3c7c3
SHA512: 97dcaffe366fb60c90f7bffd6a9c0c462a3455917e2eee033044b391d87e26966ecb6ced73aa38df1a40672e413804d8d865ff4a8c087bc950d244d0c8cbdf58
Homepage: http://bowtie-bio.sourceforge.net/
Description-en: Ultrafast memory-efficient short read aligner
This package addresses the problem to interpret the results from the
latest (2010) DNA sequencing technologies. Those will yield fairly
short stretches and those cannot be interpreted directly. It is the
challenge for tools like Bowtie to give a chromosomal location to the
short stretches of DNA sequenced per run.
.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate
of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
a Burrows-Wheeler index to keep its memory footprint small: typically
about 2.2 GB for the human genome (2.9 GB for paired-end).
Description-md5: 0321cd443ac01259f647358becd22626