How to Install and Uninstall augur Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 17,2024

1. Install "augur" package

This guide let you learn how to install augur on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                augur
            
                    
    
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2. Uninstall "augur" package

Please follow the guidance below to uninstall augur on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                augur
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the augur package on Ubuntu 21.10 (Impish Indri)

Package: augur
Architecture: all
Version: 11.0.0-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 593
Depends: python3-bcbio-gff, python3-biopython, python3-jsonschema, python3-packaging, python3-pandas (>= 0.16.2), python3-treetime, python3:any, python3-boto (>= 2.38.0), python3-cvxopt, python3-dendropy, python3-matplotlib (>= 1.5.1), python3-schedule, python3-seaborn (>= 0.6.0), seqmagick, python3-ipdb, mafft, iqtree, raxml, fasttree, vcftools
Filename: pool/universe/a/augur/augur_11.0.0-1_all.deb
Size: 128216
MD5sum: 4d75609204303f0fd6c5555453549008
SHA1: a740d989ca3b27f33f32b68a4b80477e527fe4f9
SHA256: 7803970f55894234fc300c3c1769c1b181c89f42021c553bd05362709625cd9a
SHA512: cc0d50b0e8e6bdd231a0defff6f488aee17f44869f3d3ed15b77191ced6d54dbd92ce8d2d29dc450eae3b22cd4cc40616de0d5cbabb32e3b76e2d3640dc9c97b
Homepage: https://github.com/nextstrain/augur
Description-en: pipeline components for real-time virus analysis
The nextstrain project is an attempt to make flexible informatic
pipelines and visualization tools to track ongoing pathogen evolution as
sequence data emerges. The nextstrain project derives from nextflu,
which was specific to influenza evolution.
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nextstrain is comprised of three components:
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* fauna: database and IO scripts for sequence and serological data
* augur: informatic pipelines to conduct inferences from raw data
* auspice: web app to visualize resulting inferences
Description-md5: e2aaa44840d7b632d0e95700bc100196