How to Install and Uninstall cat-bat Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 26,2024

1. Install "cat-bat" package

This is a short guide on how to install cat-bat on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cat-bat
            
                    
    
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2. Uninstall "cat-bat" package

This is a short guide on how to uninstall cat-bat on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                cat-bat
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cat-bat package on Ubuntu 21.10 (Impish Indri)

Package: cat-bat
Architecture: amd64
Version: 5.2.2-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 178
Depends: python3:any, diamond-aligner, prodigal
Filename: pool/universe/c/cat-bat/cat-bat_5.2.2-1_amd64.deb
Size: 28056
MD5sum: 688d4bc8b707d71a2ea8a21de644c005
SHA1: 22d52c62051eb8056a43f6a32c43f4521a8e86de
SHA256: c6879344a6e0fe05cbef3d32111ee7f7282140b322c7c9288ef3a545cb2055e2
SHA512: 541612e8b047341b193877a8464d742392fac3e18f4e76398508099186e073e0b3e7988b5786caa6e6264776aa9e15ea4c617a77d1ea40e1cce2c8608e27111c
Homepage: https://github.com/dutilh/CAT
Description-en: taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines
for the taxonomic classification of long DNA sequences and metagenome
assembled genomes (MAGs/bins) of both known and (highly) unknown
microorganisms, as generated by contemporary metagenomics studies. The
core algorithm of both programs involves gene calling, mapping of
predicted ORFs against the nr protein database, and voting-based
classification of the entire contig / MAG based on classification of the
individual ORFs. CAT and BAT can be run from intermediate steps if files
are formatted appropriately.
Description-md5: 55acec4eec46e52e4046f9f81dda2389