How to Install and Uninstall cat-bat Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 04,2024

1. Install "cat-bat" package

This is a short guide on how to install cat-bat on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                cat-bat
            
                    
    
    Copied

2. Uninstall "cat-bat" package

This tutorial shows how to uninstall cat-bat on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                cat-bat
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the cat-bat package on Ubuntu 20.10 (Groovy Gorilla)

Package: cat-bat
Architecture: amd64
Version: 5.0.5-2build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 202
Depends: python3:any, diamond-aligner, prodigal
Filename: pool/universe/c/cat-bat/cat-bat_5.0.5-2build1_amd64.deb
Size: 27176
MD5sum: 50b46d840d0fc769533a604a8562e43a
SHA1: a1f5e0d07c639e311a1e0cf0390be4ca3e3ec8c7
SHA256: 6ca31970da8a572f6542cb413f543e0a14377b530dbf9692ef22c9538ae9e04c
SHA512: c5e46f8ab66e9a680be951c588041c08e6e36bc32ac6316bc760539354007207ca8bdd10d739ef4857234abc395b033c415d6080a54295e140c5d516574aa483
Homepage: https://github.com/dutilh/CAT
Description-en: taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines
for the taxonomic classification of long DNA sequences and metagenome
assembled genomes (MAGs/bins) of both known and (highly) unknown
microorganisms, as generated by contemporary metagenomics studies. The
core algorithm of both programs involves gene calling, mapping of
predicted ORFs against the nr protein database, and voting-based
classification of the entire contig / MAG based on classification of the
individual ORFs. CAT and BAT can be run from intermediate steps if files
are formatted appropriately.
Description-md5: 55acec4eec46e52e4046f9f81dda2389