How to Install and Uninstall perm Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 20,2024

1. Install "perm" package

Please follow the guidelines below to install perm on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                perm
            
                    
    
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2. Uninstall "perm" package

In this section, we are going to explain the necessary steps to uninstall perm on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                perm
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the perm package on Ubuntu 21.10 (Impish Indri)

Package: perm
Architecture: amd64
Version: 0.4.0-7
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 244
Depends: libbsd0 (>= 0.0), libc6 (>= 2.33), libgcc-s1 (>= 3.4), libgomp1 (>= 4.9), libstdc++6 (>= 5.2)
Filename: pool/universe/p/perm/perm_0.4.0-7_amd64.deb
Size: 101660
MD5sum: b18742ea7aa337a31a74a888cb6f0218
SHA1: 4733775f0e518b2d9e1ce47557fec305e960fe55
SHA256: c2423c30ad8563062b3046a9289b62cff862b53aa18dda536d11a1f7a7ae9af3
SHA512: 7b3f7557fe28334b2a327718824bef0cebcb9e583bd5d2872b168d01161a18c978d2f902291376e3ba9ecbb1629229f306ae08c07b8dce9e8f3f7a63ef4d1620
Homepage: https://omictools.com/perm-tool
Description-en: efficient mapping of short reads with periodic spaced seeds
PerM is a software package which was designed to perform highly efficient
genome scale alignments for hundreds of millions of short reads produced by
the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of
providing full sensitivity for alignments within 4 mismatches for 50bp SOLID
reads and 9 mismatches for 100bp Illumina reads.
Description-md5: 5be90b2a7421a50cedfb5f9482a076fe