How to Install and Uninstall perm Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 22,2024

1. Install "perm" package

This guide let you learn how to install perm on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                perm
            
                    
    
    Copied

2. Uninstall "perm" package

Please follow the instructions below to uninstall perm on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                perm
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the perm package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: perm
Priority: optional
Section: universe/science
Installed-Size: 338
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 0.4.0-1
Depends: libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgomp1 (>= 4.2.1), libstdc++6 (>= 4.4.0)
Filename: pool/universe/p/perm/perm_0.4.0-1_amd64.deb
Size: 115274
MD5sum: af7b6ffe42a7209dfbba9bf274982a66
SHA1: 4447d190d6f84ce9f5000ace59b08e26ea1ef6d0
SHA256: 4ef1e7bceb7c46dede37001ff62a0e923b7bd396ed5d3fe8fdfa4300ca17d0f1
Description-en: efficient mapping of short reads with periodic spaced seeds
PerM is a software package which was designed to perform highly efficient
genome scale alignments for hundreds of millions of short reads produced by
the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of
providing full sensitivity for alignments within 4 mismatches for 50bp SOLID
reads and 9 mismatches for 100bp Illumina reads.
Description-md5: 5be90b2a7421a50cedfb5f9482a076fe
Homepage: http://code.google.com/p/perm/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu