Complete Guide: Installing pique-doc on Ubuntu 21.10 (Impish Indri) 2024

1. Install "pique-doc" package

Please follow the guidance below to install pique-doc on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                pique-doc
            
                    
    
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2. Uninstall "pique-doc" package

Here is a brief guide to show you how to uninstall pique-doc on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                pique-doc
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the pique-doc package on Ubuntu 21.10 (Impish Indri)

Package: pique-doc
Architecture: all
Version: 1.0-2
Priority: optional
Section: universe/doc
Source: pique
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2152
Enhances: pique
Filename: pool/universe/p/pique/pique-doc_1.0-2_all.deb
Size: 1927124
MD5sum: aee0312bc909d0c0814a91f3e8f65d4c
SHA1: 0e02313441cdd69c42baa886ba966293e15ba448
SHA256: 5b3916d708392ac390af5f9670d45af6dce8639a6e49543678ebe00d90014b20
SHA512: 127d37058582b98df3bab0be5011d2901e09845af186ddd36c2de552a80dc74adc7a83651e9f49d9e9bd514c8c0a58ada5996f6e5c85223e6d89cb4cd0aa023e
Homepage: https://github.com/tony-travis/PIQUE/
Description-en: software pipeline for performing genome wide association studies (docs)
PIQUE is a software pipeline for performing genome wide association
studies (GWAS). The main function of PIQUE is to provide ‘convenience’
wrappers that allow users to perform GWAS using the popular program
EMMAX (Kang et al., 2010) without the need to be familiar with all of
the software tools used to generate the required EMMAX input files.
PIQUE will also perform a number of quality control steps prior to
running EMMAX, ensuring that the various input data files are in the
correct format. PIQUE proceeds in two main stages although there are
multiple entry and exit points from which the pipeline can be run. The
first stage consists of running the “pique-input” program, which can
read genotype and phenotype information in several different formats and
generates all the necessary input files required to run EMMAX. The
second step in the pipeline uses the “pique-run” program to actually run
EMMAX using the files generated by “pique-input” (or pre-existing
user-supplied input files) to perform the GWAS and output the analysis
summary files.
.
This package contains the documentation as well as example data.
Description-md5: 25721dafac8d6a38338c5fefaed38d0a