How to Install and Uninstall progressivemauve Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 28,2024

1. Install "progressivemauve" package

Learn how to install progressivemauve on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                progressivemauve
            
                    
    
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2. Uninstall "progressivemauve" package

This guide let you learn how to uninstall progressivemauve on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                progressivemauve
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the progressivemauve package on Ubuntu 21.10 (Impish Indri)

Package: progressivemauve
Architecture: amd64
Version: 1.2.0+4713+dfsg-5build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 5673
Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.4), libgenome0 (>= 1.3.11+svn20110227.4616), libmems1 (>= 1.6.0+4725), libstdc++6 (>= 9)
Enhances: mauve-aligner
Filename: pool/universe/p/progressivemauve/progressivemauve_1.2.0+4713+dfsg-5build1_amd64.deb
Size: 869288
MD5sum: 583c7ad58e11ef805d0e5fab2f808757
SHA1: 7c9f8101213a846b1b301fa6b69a3dbde89f2807
SHA256: 6abe227f4aba7b491dc157ab46cd0d4ab07cc4cb002d4ddbb4e35bd39e0e124a
SHA512: 460f057b9ef6480a2508735d455c3ad639217c097b3ea031bad254490ddadc9d34d85d237edfe783ce608eae3b7b61e6714bdc9d9467ccb275344a41666b9bed
Homepage: https://darlinglab.org/mauve/user-guide/mauvealigner.html
Description-en: multiple genome alignment algorithms
The mauveAligner and progressiveMauve alignment algorithms have been
implemented as command-line programs included with the downloadable Mauve
software. When run from the command-line, these programs provide options
not yet available in the graphical interface.
.
Mauve is a system for efficiently constructing multiple genome alignments
in the presence of large-scale evolutionary events such as rearrangement
and inversion. Multiple genome alignment provides a basis for research
into comparative genomics and the study of evolutionary dynamics. Aligning
whole genomes is a fundamentally different problem than aligning short
sequences.
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Mauve has been developed with the idea that a multiple genome aligner
should require only modest computational resources. It employs algorithmic
techniques that scale well in the amount of sequence being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute,
while a group of 9 divergent Enterobacterial genomes can be aligned in
a few hours.
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Mauve computes and interactively visualizes genome sequence comparisons.
Using FastA or GenBank sequence data, Mauve constructs multiple genome
alignments that identify large-scale rearrangement, gene gain, gene loss,
indels, and nucleotide substutition.
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Mauve is developed at the University of Wisconsin.
Description-md5: 1b3a5c7db196a734331de35b5112fef8