How to Install and Uninstall progressivemauve Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 22,2024

1. Install "progressivemauve" package

Please follow the instructions below to install progressivemauve on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                progressivemauve
            
                    
    
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2. Uninstall "progressivemauve" package

Please follow the instructions below to uninstall progressivemauve on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                progressivemauve
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the progressivemauve package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: progressivemauve
Priority: optional
Section: universe/science
Installed-Size: 5215
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.2.0+4713-2
Replaces: mauvealigner (<= 1.2.0+4713-1)
Depends: libboost-filesystem1.58.0, libboost-iostreams1.58.0, libboost-program-options1.58.0, libboost-system1.58.0, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgenome-1.3-0v5, libmems-1.6-1v5, libmuscle-3.7-1, libstdc++6 (>= 5.2)
Breaks: mauvealigner (<= 1.2.0+4713-1)
Filename: pool/universe/p/progressivemauve/progressivemauve_1.2.0+4713-2_amd64.deb
Size: 849404
MD5sum: 7d76887306fb37e685a5bdd90cb5f0f9
SHA1: b5091ba888eec3d66998bb8181c781bad87a44b3
SHA256: 3abfdf8c6ae8ad8bd64d104ee20f9268ece191a9073a8c4bc0ced9da11dd81b7
Description-en: multiple genome alignment algorithms
The mauveAligner and progressiveMauve alignment algorithms have been
implemented as command-line programs included with the downloadable Mauve
software. When run from the command-line, these programs provide options
not yet available in the graphical interface.
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Mauve is a system for efficiently constructing multiple genome alignments
in the presence of large-scale evolutionary events such as rearrangement
and inversion. Multiple genome alignment provides a basis for research
into comparative genomics and the study of evolutionary dynamics. Aligning
whole genomes is a fundamentally different problem than aligning short
sequences.
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Mauve has been developed with the idea that a multiple genome aligner
should require only modest computational resources. It employs algorithmic
techniques that scale well in the amount of sequence being aligned. For
example, a pair of Y. pestis genomes can be aligned in under a minute,
while a group of 9 divergent Enterobacterial genomes can be aligned in
a few hours.
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Mauve computes and interactively visualizes genome sequence comparisons.
Using FastA or GenBank sequence data, Mauve constructs multiple genome
alignments that identify large-scale rearrangement, gene gain, gene loss,
indels, and nucleotide substutition.
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Mauve is developed at the University of Wisconsin.
Description-md5: 1b3a5c7db196a734331de35b5112fef8
Enhances: mauve-aligner
Homepage: http://darlinglab.org/mauve/user-guide/mauvealigner.html
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu