How to Install and Uninstall python3-bcbio Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "python3-bcbio" package

Please follow the steps below to install python3-bcbio on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                python3-bcbio
            
                    
    
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2. Uninstall "python3-bcbio" package

Please follow the instructions below to uninstall python3-bcbio on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                python3-bcbio
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the python3-bcbio package on Ubuntu 21.10 (Impish Indri)

Package: python3-bcbio
Architecture: all
Version: 1.2.5-1
Priority: optional
Section: multiverse/science
Source: bcbio
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4817
Depends: python3:any, python3-biopython, python3-cyvcf2, python3-joblib, python3-logbook, python3-matplotlib, python3-psutil, python3-pysam, python3-requests, python3-scipy, python3-six, python3-tornado
Recommends: cnvkit, gsort, libfreetype6, lumpy-sv, mosdepth, multiqc, python3-arrow, python3-geneimpacts, python3-h5py, python3-pyvcf, python3-seqcluster, python3-statsmodels, python3-tabulate, r-other-wasabi, r-bioc-purecn, r-bioc-titancna, seqan-apps, vcfanno, vt
Suggests: bcbio-doc, python3-bioblend, python3-dnapilib, python3-msgpack
Filename: pool/multiverse/b/bcbio/python3-bcbio_1.2.5-1_all.deb
Size: 1228964
MD5sum: d395bd6d45d0d3b2ff8d01bf2a20634a
SHA1: bd9249365dcce7ea7c9ff66ab109c67cf0fe136f
SHA256: e1a2e2f7a18d49e87f06f26aa9ab8577b5624d8f9955c3e2395fa2a482f50c88
SHA512: 19db3efe41db1d11c70abd1db5ee7f97c4f7c01beb031b57d004505e3790cb9ed8831485297855f4ed0dfcd9843ebbd063c99b1620f47c2661251ad6a08a094d
Homepage: https://github.com/bcbio/bcbio-nextgen
Description-en: library for analysing high-throughput sequencing data
This package installs the Python 3 libraries of the bcbio-nextgen
toolkit implementing best-practice pipelines for fully automated high
throughput sequencing analysis.
.
A high-level configuration file specifies inputs and analysis parameters
to drive a parallel pipeline that handles distributed execution,
idempotent processing restarts and safe transactional steps. The project
contributes a shared community resource that handles the data processing
component of sequencing analysis, providing researchers with more time
to focus on the downstream biology.
Description-md5: 9ba9c6a28ef65d1e05ddf9f71cdfb1f9