How to Install and Uninstall r-bioc-monocle Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 24,2024

1. Install "r-bioc-monocle" package

Here is a brief guide to show you how to install r-bioc-monocle on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-monocle
            
                    
    
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2. Uninstall "r-bioc-monocle" package

Learn how to uninstall r-bioc-monocle on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-monocle
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-monocle package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-monocle
Architecture: amd64
Version: 2.18.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1742
Depends: r-base-core (>= 4.0.2-1build1), r-api-4.0, r-api-bioc-3.12, r-cran-matrix (>= 1.2-6), r-bioc-biobase, r-cran-ggplot2 (>= 1.0.0), r-cran-vgam (>= 1.0-6), r-cran-ddrtree (>= 0.1.4), r-cran-igraph (>= 1.0.1), r-bioc-biocgenerics, r-bioc-hsmmsinglecell (>= 0.101.5), r-cran-plyr, r-cran-cluster, r-cran-combinat, r-cran-fastica, r-cran-irlba (>= 2.0.0), r-cran-matrixstats, r-cran-densityclust (>= 0.3), r-cran-rtsne, r-cran-mass, r-cran-reshape2, r-bioc-limma, r-cran-tibble, r-cran-dplyr, r-cran-qlcmatrix, r-cran-pheatmap, r-cran-stringr, r-cran-proxy, r-cran-slam, r-cran-viridis, r-bioc-biocviews, r-cran-rann (>= 2.5), r-cran-rcpp (>= 0.12.0), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Recommends: r-cran-testthat
Suggests: r-bioc-destiny, r-cran-hmisc, r-cran-knitr, r-cran-seurat, r-bioc-scater
Filename: pool/universe/r/r-bioc-monocle/r-bioc-monocle_2.18.0-1_amd64.deb
Size: 1468292
MD5sum: dcd36643077b6ae6c647f7db4143c893
SHA1: 8ef3c3089e6b80faba426a0acbe7b1a87aa81ac5
SHA256: 474625e478bd04dbd625417c45db0e54f95585b64bf4570ce1a92f9e708c8c4f
SHA512: 99938482dd60ae548e3fbecf438c456d6be22dd3b266b4ea4eb4b844cfde97326dc716f2e1ebb9b2af269211004b1000068d168c1d8fdf21d3185d4cfc39b689
Homepage: https://bioconductor.org/packages/monocle/
Description-en: clustering, differential expression, and trajectory analysis for RNA-Seq
Monocle performs differential expression and time-series analysis
for single-cell expression experiments. It orders individual cells
according to progress through a biological process, without knowing ahead
of time which genes define progress through that process. Monocle also
performs differential expression analysis, clustering, visualization, and
other useful tasks on single cell expression data. It is designed to work
with RNA-Seq and qPCR data, but could be used with other types as well.
Description-md5: b7920263571f538286516ee16ed83a1e