How to Install and Uninstall r-bioc-mutationalpatterns Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 24,2024

1. Install "r-bioc-mutationalpatterns" package

This is a short guide on how to install r-bioc-mutationalpatterns on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-mutationalpatterns
            
                    
    
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2. Uninstall "r-bioc-mutationalpatterns" package

Please follow the guidelines below to uninstall r-bioc-mutationalpatterns on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-mutationalpatterns
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-mutationalpatterns package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-mutationalpatterns
Architecture: all
Version: 3.0.1+dfsg-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 5060
Depends: r-base-core (>= 4.0.4-1build1), r-api-4.0, r-api-bioc-3.12, r-bioc-genomicranges (>= 1.24.0), r-cran-nmf (>= 0.20.6), r-bioc-s4vectors, r-bioc-biocgenerics (>= 0.18.0), r-bioc-bsgenome (>= 1.40.0), r-bioc-variantannotation (>= 1.18.1), r-cran-dplyr (>= 0.8.3), r-cran-tibble (>= 2.1.3), r-cran-purrr (>= 0.3.2), r-cran-tidyr (>= 1.0.0), r-cran-stringr (>= 1.4.0), r-cran-magrittr (>= 1.5), r-cran-ggplot2 (>= 2.1.0), r-cran-pracma (>= 1.8.8), r-bioc-iranges (>= 2.6.0), r-bioc-genomeinfodb (>= 1.12.0), r-bioc-biostrings (>= 2.40.0), r-cran-ggdendro (>= 0.1-20), r-cran-cowplot (>= 0.9.2), r-cran-ggalluvial (>= 0.12.2)
Suggests: r-bioc-biocstyle (>= 2.0.3), r-bioc-biomart (>= 2.28.0), r-cran-gridextra (>= 2.2.1), r-bioc-rtracklayer (>= 1.32.2), r-bioc-genomicfeatures, r-bioc-annotationdbi, r-cran-testthat, r-cran-knitr, r-cran-rmarkdown
Filename: pool/universe/r/r-bioc-mutationalpatterns/r-bioc-mutationalpatterns_3.0.1+dfsg-2_all.deb
Size: 2294236
MD5sum: 1c7ba621ebf4e48f61d61d8a56450c24
SHA1: 7e58587c0fb4f8357eb0658c661cda0083379984
SHA256: 787ed3b8e91caf27955a8adf14529b5fd14f6c10141abe047554c150da2c9e53
SHA512: ba4499641e9224d2c8cf42bb15ceb679b08c01e84ca3244a6585d828e87ff02c1a7ee64b47a805eb7b31c15feddf9b68563b59c65dedfcfbdef93a1c1601bafb
Homepage: https://bioconductor.org/packages/MutationalPatterns/
Description-en: GNU R comprehensive genome-wide analysis of mutational processes
This BioConductor package provides an extensive toolset for the
characterization and visualization of a wide range of mutational patterns
in base substitution catalogs.
Description-md5: df77cf7ee6fedf752a634a6c8a0008c4