How to Install and Uninstall r-cran-sctransform Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 26,2024

1. Install "r-cran-sctransform" package

This tutorial shows how to install r-cran-sctransform on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-cran-sctransform
            
                    
    
    Copied

2. Uninstall "r-cran-sctransform" package

Please follow the step by step instructions below to uninstall r-cran-sctransform on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                r-cran-sctransform
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-cran-sctransform package on Ubuntu 21.10 (Impish Indri)

Package: r-cran-sctransform
Architecture: amd64
Version: 0.3.2-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 590
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-cran-mass, r-cran-matrix, r-cran-future.apply, r-cran-future, r-cran-ggplot2, r-cran-reshape2, r-cran-gridextra, r-cran-matrixstats, r-cran-rcpparmadillo, r-cran-rcpp (>= 0.11.0), libblas3 | libblas.so.3, libc6 (>= 2.29), libgcc-s1 (>= 3.0), liblapack3 | liblapack.so.3, libstdc++6 (>= 9)
Recommends: r-cran-testthat
Suggests: r-cran-irlba, r-cran-knitr
Filename: pool/universe/r/r-cran-sctransform/r-cran-sctransform_0.3.2-1_amd64.deb
Size: 397776
MD5sum: 428bbce2bfbf0510790b0111cd521728
SHA1: 1faa2e605e596086ad4d7e59d485d40677815540
SHA256: 637ab6e709266732569028befb7cfdc4ee63f13e2a466005119d307921139984
SHA512: f655181f8701a96770cce33a06c6e72402d22d8baa02522501b8ccc34707d2a648c9fee6fd2fed6cf613c615087734792bf6afc3f2b54c3dfee2e7c85333c66a
Homepage: https://cran.r-project.org/package=sctransform
Description-en: Variance Stabilizing Transformations for Single Cell UMI Data
A normalization method for single-cell UMI count data using a
variance stabilizing transformation. The transformation is based on a
negative binomial regression model with regularized parameters. As part of the
same regression framework, this package also provides functions for
batch correction, and data correction. See Hafemeister and Satija 2019
for more details.
Description-md5: 7d96f8664a9a855819d1bbe2d077943c