How to Install and Uninstall r-cran-seurat Package on Ubuntu 21.10 (Impish Indri)

Last updated: December 23,2024

1. Install "r-cran-seurat" package

This is a short guide on how to install r-cran-seurat on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-cran-seurat
            
                    
    
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2. Uninstall "r-cran-seurat" package

This tutorial shows how to uninstall r-cran-seurat on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-cran-seurat
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-cran-seurat package on Ubuntu 21.10 (Impish Indri)

Package: r-cran-seurat
Architecture: amd64
Version: 4.0.0-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 3286
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-cran-cluster, r-cran-cowplot, r-cran-fitdistrplus, r-cran-future, r-cran-future.apply, r-cran-ggplot2 (>= 3.3.0), r-cran-ggrepel, r-cran-ggridges, r-cran-httr, r-cran-ica, r-cran-igraph, r-cran-irlba, r-cran-jsonlite, r-cran-kernsmooth, r-cran-leiden (>= 0.3.1), r-cran-lmtest, r-cran-mass, r-cran-matrix (>= 1.2-14), r-cran-matrixstats, r-cran-miniui, r-cran-patchwork, r-cran-pbapply, r-cran-plotly (>= 4.9.0), r-cran-png, r-cran-rann, r-cran-rcolorbrewer, r-cran-rcpp (>= 0.11.0), r-cran-rcppannoy (>= 0.0.18), r-cran-reticulate, r-cran-rlang, r-cran-rocr, r-cran-rtsne, r-cran-scales, r-cran-scattermore (>= 0.7), r-cran-sctransform (>= 0.3.2), r-cran-seuratobject, r-cran-shiny, r-cran-spatstat, r-cran-tibble, r-cran-uwot (>= 0.1.9), r-cran-rcppeigen, r-cran-rcppprogress, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2)
Recommends: r-cran-testthat, r-cran-hdf5r
Suggests: r-cran-ape, r-cran-rsvd, r-bioc-s4vectors, r-bioc-summarizedexperiment, r-bioc-singlecellexperiment, r-bioc-deseq2, r-bioc-biocgenerics, r-bioc-genomicranges, r-bioc-genomeinfodb, r-bioc-iranges, r-bioc-rtracklayer, r-bioc-monocle, r-bioc-biobase, r-cran-vgam, r-bioc-limma, r-cran-metap, r-cran-mixtools
Filename: pool/universe/r/r-cran-seurat/r-cran-seurat_4.0.0-2_amd64.deb
Size: 2806216
MD5sum: d337be412f44decdd2d0406bd82bd769
SHA1: d94623c516d0f6979b8562b7ab7ee71d8c016b0d
SHA256: a9a38c655a05e60222aab8e91473fb41b66e1237b37cd0e491ccc6a5f7391a5d
SHA512: 045eed82710c5b01cf771ced9a6b644cb8082236f7333a618a5387342107b7c5f96805cf4134f73f5267f8f68e405905d8428a837fc0fdc921640bd674aca94c
Homepage: https://cran.r-project.org/package=Seurat
Description-en: Tools for Single Cell Genomics
A toolkit for quality control, analysis, and exploration of single cell
RNA sequencing data. 'Seurat' aims to enable users to identify and
interpret sources of heterogeneity from single cell transcriptomic
measurements, and to integrate diverse types of single cell data. See
Satija R, Farrell J, Gennert D, et al (2015) ,
Macosko E, Basu A, Satija R, et al (2015)
, and Butler A and Satija R (2017)
for more details.
Description-md5: e659572039d49e2404d6bbc88edb145d