How to Install and Uninstall tree-ppuzzle Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "tree-ppuzzle" package

In this section, we are going to explain the necessary steps to install tree-ppuzzle on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                tree-ppuzzle
            
                    
    
    Copied

2. Uninstall "tree-ppuzzle" package

Please follow the guidelines below to uninstall tree-ppuzzle on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                tree-ppuzzle
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the tree-ppuzzle package on Ubuntu 21.10 (Impish Indri)

Package: tree-ppuzzle
Architecture: amd64
Version: 5.3~rc16+dfsg-8
Priority: optional
Section: universe/science
Source: tree-puzzle
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 422
Depends: libc6 (>= 2.29), libopenmpi3 (>= 4.1.0), libsprng2, openmpi-bin
Recommends: tree-puzzle-doc
Suggests: phylip, treetool
Filename: pool/universe/t/tree-puzzle/tree-ppuzzle_5.3~rc16+dfsg-8_amd64.deb
Size: 170004
MD5sum: 6fdd0573ae9086431c097fc59a84ac79
SHA1: 5db1df75cbfa4a2cab5ee0f6820671e98079c989
SHA256: 2d5b403b8cf609592f7f66c390bdcbcdae71b49fdb80247d48fc9a7b389b8a6b
SHA512: dc78cb2aeb1a80e36c5f27f5165c23b87d399419c81b26548fa300f0a2194f4a841c91d7d86a7a09b6206117ad3792f9a5ee86beb5bddc61add96469803424b0
Homepage: http://www.tree-puzzle.de
Description-en: Parallelized reconstruction of phylogenetic trees by maximum likelihood
TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that
implements a fast tree search algorithm, quartet puzzling, that allows
analysis of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
Branch lengths can also be calculated under the clock-assumption. In
addition, TREE-PUZZLE offers a novel method, likelihood mapping, to
investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content of
a sequence alignment.
.
This is the parallelized version of tree-puzzle.
Description-md5: f51dfdee73ef2bf17a344aa9cbb9a6bd