Complete Guide: Installing umis on Ubuntu 21.10 (Impish Indri) 2024

1. Install "umis" package

Please follow the step by step instructions below to install umis on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                umis
            
                    
    
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2. Uninstall "umis" package

Please follow the guidance below to uninstall umis on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                umis
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the umis package on Ubuntu 21.10 (Impish Indri)

Package: umis
Architecture: amd64
Version: 1.0.7-1build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 111
Depends: libc6 (>= 2.4), python3 (<< 3.10), python3 (>= 3.9~), python3-click, python3-pandas, python3-pysam, python3-regex, python3-scipy, python3-toolz, python3:any
Suggests: umis-examples
Filename: pool/universe/u/umis/umis_1.0.7-1build1_amd64.deb
Size: 23976
MD5sum: 061de9235e4c24c571fe26c0fa56c884
SHA1: 2237d12d30d6577abcc3bce039d5e758aa446b6e
SHA256: 0b3be04c9f60e317359439bc71349c976eb5618570d62166ecbe8d4807885e23
SHA512: 0101fa6318614d27991d62eda059421562b932a80996374a0c88cfc5fd8c84a4004eeb1bde5bd39d12811af548033f0ca954eb7e0cfa11cdf6f5ee81532af1d0
Homepage: https://github.com/vals/umis
Description-en: tools for processing UMI RNA-tag data
Umis provides tools for estimating expression in RNA-Seq data which
performs sequencing of end tags of transcript, and incorporate molecular
tags to correct for amplification bias.
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There are four steps in this process.
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1. Formatting reads
2. Filtering noisy cellular barcodes
3. Pseudo-mapping to cDNAs
4. Counting molecular identifiers
Description-md5: a3b735a2910d31a823cc6d0b3e6915f6